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Error in eval(predvars, data, env) : object 'log_umi' not found #194

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Tycooner opened this issue Dec 4, 2023 · 3 comments

Tycooner commented Dec 4, 2023

what it means ?

yzh37545 commented Dec 18, 2023

same issue

hoangan-nguyen commented Jan 26, 2024 •

edited

Calculate log10(nCount) and put into the query metadata query@meta.data['log_umi'] <- log10(calcn$nCount)

StefanMDPhD commented Jan 30, 2024

@hoangan-nguyen. Thanks that really helped. Specifically what worked for me was: query@meta.data['log_umi'] <- log10(query$nCount_RNA)

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