gnu make works now for ParMETIS4

schism-dev · May 7, 2020 · 14e201f · 14e201f
1 parent 139cf2f
commit 14e201f
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diff --git a/mk/Make.defs.HZG b/mk/Make.defs.HZG
@@ -48,7 +48,7 @@ PPFLAGS := $(PPFLAGS) -DMPIVERSION=1
 FCPFLAGS = $(PPFLAGS) -O2 -assume byterecl #MPI code
 FLDFLAGS = -O2
 #####Libraries
-MTSLIBS = -L/home/zhangj/SELFE/svn/tags/v3.2.0/ParMetis-3.1-Sep2010 -lparmetis -lmetis
+##MTSLIBS = -L/home/zhangj/SELFE/svn/tags/v3.2.0/ParMetis-3.1-Sep2010 -lparmetis -lmetis
 CDFLIBS = -L/opt/intel/netcdf-3.6.3/lib/ -lnetcdf #-L/opt/intel/fce/10.1.015/lib/ -lirc
 CDFMOD = -I/opt/intel/netcdf-3.6.3/include/ # modules for netcdf
 

diff --git a/mk/Make.defs.JUROPA b/mk/Make.defs.JUROPA
@@ -48,7 +48,7 @@ FCPFLAGS = $(PPFLAGS) -heap-arrays -ipo -assume byterecl #MPI code
 #FCSFLAGS = $(FFCPFLAGS)
 FLDFLAGS = -ipo #-I$(MPIHOME)/include/
 #####Libraries
-MTSLIBS = -L./ParMetis-3.1-Sep2010 -lparmetis -lmetis  #MTSLIBS = -L/home/grashorn/selfe_source/ParMetis-3.1-Sep2010 -lparmetis -lmetis
+##MTSLIBS = -L./ParMetis-3.1-Sep2010 -lparmetis -lmetis  #MTSLIBS = -L/home/grashorn/selfe_source/ParMetis-3.1-Sep2010 -lparmetis -lmetis
 CDFLIBS = -L/usr/local/netcdf/v4.1.1_classic/lib -lnetcdf -netcdff #-L$(NETCDF_HOME)/lib/ -lnetcdf -lnetcdff #-L$(NETCDFHOME)/lib/ -lnetcdf -lnetcdff #-L/opt/intel/fce/10.1.015/lib/ -lirc
 CDFMOD = -I/usr/local/netcdf/v4.1.1_classic/include #-I$(NETCDF_HOME)/include/ #-I$(NETCDFHOME)/include/
 ################################################################################

diff --git a/mk/Make.defs.Thor b/mk/Make.defs.Thor
@@ -62,7 +62,7 @@ FLDFLAGS = $(OPTFLAGS)
 ################################################################################
 # Parmetis
 METIS_PATH=../src/ParMetis-3.1-Sep2010/
-MTSLIBS = -L$(METIS_PATH) -lparmetis -lmetis
+##MTSLIBS = -L$(METIS_PATH) -lparmetis -lmetis
 
 
 ################################################################################

diff --git a/mk/Make.defs.anvil b/mk/Make.defs.anvil
@@ -58,7 +58,7 @@ FLDFLAGS = -O2 -mcmodel=medium -init=zero -xCORE-AVX2 -assume buffered_io
 #FLDFLAGS = -O3 -mcmodel=medium -shared-intel #for final linking of object files
 
 #####Libraries
-MTSLIBS = -L./ParMetis-3.1-Sep2010.mpiicc/ -lparmetis -lmetis
+#MTSLIBS = -L./ParMetis-3.1-Sep2010.mpiicc/ -lparmetis -lmetis
 
 #CDFLIBS = -L/soft/spack-0.10.1/opt/spack/linux-centos6-x86_64/intel-18.0.3/netcdf-4.6.2-b2ikacatjnjjeuwajzmkzz3d4rrh5tr3/lib -L/soft/spack-0.10.1/opt/spack/linux-centos6-x86_64/intel-18.0.3/netcdf-fortran-4.4.4-x2wtfpgcyy7g5br6anfyny765db7f2ym/lib/ -lnetcdf -lnetcdff
 #CDFMOD = -I/soft/spack-0.10.1/opt/spack/linux-centos6-x86_64/intel-18.0.3/netcdf-4.6.2-b2ikacatjnjjeuwajzmkzz3d4rrh5tr3/include/ -I/soft/spack-0.10.1/opt/spack/linux-centos6-x86_64/intel-18.0.3/netcdf-fortran-4.4.4-x2wtfpgcyy7g5br6anfyny765db7f2ym/include/

diff --git a/mk/Make.defs.aron b/mk/Make.defs.aron
@@ -63,7 +63,7 @@ PPFLAGS := $(PPFLAGS) -DMPIVERSION=2
 ##########################################################################################
 #####Libraries
 #From my own dir
-MTSLIBS = -L$(METIS_PATH)/lib -lparmetis -lmetis 
+#MTSLIBS = -L$(METIS_PATH)/lib -lparmetis -lmetis 
 #From Harry's dir
 #MTSLIBS = -L/work/01555/harryw/ParMetis-3.1-64bit/ -lparmetis -lmetis
 

diff --git a/mk/Make.defs.aron.cluster b/mk/Make.defs.aron.cluster
@@ -63,7 +63,7 @@ PPFLAGS := $(PPFLAGS) -DMPIVERSION=2
 ##########################################################################################
 #####Libraries
 #From my own dir
-MTSLIBS = -L/home/aron/opt/ParMetis-3.1-64bit -lparmetis -lmetis 
+#MTSLIBS = -L/home/aron/opt/ParMetis-3.1-64bit -lparmetis -lmetis 
 #From Harry's dir
 #MTSLIBS = -L/work/01555/harryw/ParMetis-3.1-64bit/ -lparmetis -lmetis
 

diff --git a/mk/Make.defs.aron.datamor b/mk/Make.defs.aron.datamor
@@ -63,7 +63,7 @@ PPFLAGS := $(PPFLAGS) -DMPIVERSION=2
 ##########################################################################################
 #####Libraries
 #From my own dir
-MTSLIBS = -L$(METIS_PATH)/lib -lparmetis -lmetis 
+#MTSLIBS = -L$(METIS_PATH)/lib -lparmetis -lmetis 
 #From Harry's dir
 #MTSLIBS = -L/work/01555/harryw/ParMetis-3.1-64bit/ -lparmetis -lmetis
 

diff --git a/mk/Make.defs.aron.gnu b/mk/Make.defs.aron.gnu
@@ -58,7 +58,7 @@ FLDFLAGS = $(OPTFLAGS) #for final linking of object files
 
 #####Libraries
 #MTSLIBS = -L/usr/lib/ -lparmetis -lmetis
-MTSLIBS = -L./ParMetis-3.1-Sep2010 -lparmetis -lmetis
+#MTSLIBS = -L./ParMetis-3.1-Sep2010 -lparmetis -lmetis
 CDFLIBS = -L/home/aron/opt/netcdf_gfortran/lib/ -lnetcdf -lnetcdff
 CDFMOD = -I/home/aron/opt/netcdf_gfortran/include/ # modules for netcdf
 

diff --git a/mk/Make.defs.aron.lenovo b/mk/Make.defs.aron.lenovo
@@ -63,7 +63,7 @@ PPFLAGS := $(PPFLAGS) -DMPIVERSION=2
 ##########################################################################################
 #####Libraries
 #From my own dir
-MTSLIBS = -L$(METIS_PATH)/lib -lparmetis -lmetis 
+#MTSLIBS = -L$(METIS_PATH)/lib -lparmetis -lmetis 
 #From Harry's dir
 #MTSLIBS = -L/work/01555/harryw/ParMetis-3.1-64bit/ -lparmetis -lmetis
 

diff --git a/mk/Make.defs.bebop b/mk/Make.defs.bebop
@@ -56,7 +56,7 @@ FCPFLAGS = $(PPFLAGS) -O2 -mcmodel=medium -init=zero -xCORE-AVX2 -assume buffere
 FLDFLAGS = -O2 -mcmodel=medium -init=zero -xCORE-AVX2 -assume buffered_io  #-shared-intel
 
 #####Libraries
-MTSLIBS = -L./ParMetis-3.1-Sep2010.mpiicc/ -lparmetis -lmetis
+#MTSLIBS = -L./ParMetis-3.1-Sep2010.mpiicc/ -lparmetis -lmetis
 
 CDFLIBS = -L/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/netcdf-4.6.1-2gzedijmixtvgaspv2plrlb3yms6svlx/lib/ -L/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/netcdf-fortran-4.4.4-nc364y7zbv3mhr3l6bcn6ansthqabu5x/lib/ -lnetcdf -lnetcdff
 CDFMOD = -I/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/netcdf-4.6.1-2gzedijmixtvgaspv2plrlb3yms6svlx/include/ -I/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/netcdf-fortran-4.4.4-nc364y7zbv3mhr3l6bcn6ansthqabu5x/include/

diff --git a/mk/Make.defs.bfg.gnu b/mk/Make.defs.bfg.gnu
@@ -66,7 +66,7 @@ FLDFLAGS = $(OPTFLAGS) #for final linking of object files
 
 ##### Libraries
 # ParMETIS
-MTSLIBS = -L./ParMetis-3.1-Sep2010  -lparmetis -lmetis  
+#MTSLIBS = -L./ParMetis-3.1-Sep2010  -lparmetis -lmetis  
 CDFLIBS = -L/usr/lib64 -lnetcdf  -L/opt/netcdf-fortran/lib -lnetcdff #-L/opt/mvapich2-2.1rc2/lib -lfmpich -lmpich -lmpi # oss-hpc01
 CDFMOD = -I/usr/include -I/opt/netcdf-fortran/include # modules for netcdf 
 

diff --git a/mk/Make.defs.bora b/mk/Make.defs.bora
@@ -62,8 +62,7 @@ FLDFLAGS = -O2 -mcmodel=medium -ipo -axCORE-AVX2 -xSSE4.2 ##-heap-arrays #for fi
 #EXEC := $(EXEC)_OMP
 
 #####Libraries
-##MTSLIBS = -L/share/apps/ParMetis-3.1-Sep2010/ -lparmetis -lmetis
-MTSLIBS = -L./ParMetis-3.1-Sep2010/ -lparmetis -lmetis
+#MTSLIBS = -L./ParMetis-3.1-Sep2010/ -lparmetis -lmetis
 CDFLIBS = -L$(NETCDF_FORTRAN)/lib -L$(NETCDF)/lib -lnetcdf -lnetcdff
 CDFMOD = -I$(NETCDF)/include -I$(NETCDF_FORTRAN)/include # modules for netcdf
 

diff --git a/mk/Make.defs.centos.gnu.mpi b/mk/Make.defs.centos.gnu.mpi
@@ -53,7 +53,7 @@ FCPFLAGS = $(PPFLAGS) $(OPTFLAGS) -static -static-libgfortran #-g -fbacktrace #-
 FLDFLAGS = $(OPTFLAGS) #for final linking of object files
 
   #####Libraries
-MTSLIBS = -L./ParMetis-3.1-Sep2010/ -lparmetis -lmetis
+#MTSLIBS = -L./ParMetis-3.1-Sep2010/ -lparmetis -lmetis
 CDFLIBS = -L/usr/lib64/ -lnetcdff
 CDFMOD = -I/usr/include/ -I/usr/lib64/gfortran/modules/ # modules for netcdf
 

diff --git a/mk/Make.defs.centos.gnu.ompi b/mk/Make.defs.centos.gnu.ompi
@@ -64,7 +64,7 @@ FCPFLAGS = $(PPFLAGS) $(OPTFLAGS) -static -static-libgfortran #-g -fbacktrace #-
 FLDFLAGS = $(OPTFLAGS) #for final linking of object files
 
   #####Libraries
-MTSLIBS = -L./ParMetis-3.1-Sep2010/ -lparmetis -lmetis
+#MTSLIBS = -L./ParMetis-3.1-Sep2010/ -lparmetis -lmetis
 CDFLIBS = -L/usr/lib64/ -lnetcdff
 CDFMOD = -I/usr/include/ -I/usr/lib64/gfortran/modules/ # modules for netcdf
 

diff --git a/mk/Make.defs.ches b/mk/Make.defs.ches
@@ -60,7 +60,7 @@ FCPFLAGS = $(PPFLAGS) -fast -Mcache_align -Mipa=fast,inline -Msmartalloc -tp pil
 FLDFLAGS = -O2  -Mcache_align -tp piledriver -m64 
 
 #####Libraries
-MTSLIBS = -L./ParMetis-3.1-Sep2010 -lparmetis -lmetis
+#MTSLIBS = -L./ParMetis-3.1-Sep2010 -lparmetis -lmetis
 CDFLIBS = -L$(NETCDF_FORTRAN)/lib -L$(NETCDF)/lib -lnetcdff
 CDFMOD = -I$(NETCDF)/include -I$(NETCDF_FORTRAN)/include # modules for netcdf
 

diff --git a/mk/Make.defs.ches.gnu b/mk/Make.defs.ches.gnu
@@ -65,7 +65,7 @@ FLDFLAGS = -O2
 #EXEC := $(EXEC)_OMP
 
 #####Libraries
-MTSLIBS = -L./ParMetis-3.1-Sep2010 -lparmetis -lmetis
+##MTSLIBS = -L./ParMetis-3.1-Sep2010 -lparmetis -lmetis
 CDFLIBS = -L$(NETCDF)/lib -lnetcdf
 CDFMOD = -I$(NETCDF)/include # modules for netcdf
 

diff --git a/mk/Make.defs.ches.intel b/mk/Make.defs.ches.intel
@@ -59,8 +59,7 @@ FLDFLAGS = -O2 -mcmodel=medium #-CB -g -traceback #for final linking of object f
 #EXEC := $(EXEC)_OMP
 
 #####Libraries
-##MTSLIBS = -L/share/apps/ParMetis-3.1-Sep2010/ -lparmetis -lmetis
-MTSLIBS = -L./ParMetis-3.1-Sep2010/ -lparmetis -lmetis
+#MTSLIBS = -L./ParMetis-3.1-Sep2010/ -lparmetis -lmetis
 CDFLIBS = -L$(NETCDF_FORTRAN)/lib -L$(NETCDF)/lib -lnetcdff
 CDFMOD = -I$(NETCDF)/include -I$(NETCDF_FORTRAN)/include # modules for netcdf
 

diff --git a/mk/Make.defs.comet b/mk/Make.defs.comet
@@ -62,7 +62,7 @@ FLDFLAGS = -O2 -xHOST -mcmodel=medium -shared-intel #-CB -g -traceback #for fina
 #EXEC := $(EXEC)_OMP
 
 #####Libraries
-MTSLIBS = -L./ParMetis-3.1-Sep2010.mpiicc/ -lparmetis -lmetis
+##MTSLIBS = -L./ParMetis-3.1-Sep2010.mpiicc/ -lparmetis -lmetis
 
 CDFLIBS = -L${NETCDFHOME}/lib -lnetcdff
 CDFMOD = -I${NETCDFHOME}/include # modules for netcdf

diff --git a/mk/Make.defs.cori2 b/mk/Make.defs.cori2
@@ -61,7 +61,7 @@ FLDFLAGS =  #for final linking of object files
 #EXEC := $(EXEC)_OMP
 
 #Libraries
-MTSLIBS = -L./ParMetis-3.1-Sep2010.cray/ -lparmetis -lmetis
+##MTSLIBS = -L./ParMetis-3.1-Sep2010.cray/ -lparmetis -lmetis
 CDFLIBS = -L$(NETCDF)/lib -lnetcdf -lnetcdff
 CDFMOD = -I$(NETCDF)/include/ # modules for netcdf
 

diff --git a/mk/Make.defs.cyclops b/mk/Make.defs.cyclops
@@ -49,7 +49,7 @@ FCPFLAGS = $(PPFLAGS) -O2 -xCORE-AVX2 #-qopenmp
 #FCSFLAGS = $(FFCPFLAGS)
 FLDFLAGS = -O2 -xCORE-AVX2 -fma -align array64byte -finline-functions -mcmodel medium -shared-intel #-fPIC  
 #####Libraries
-MTSLIBS = -L./ParMetis-3.1-Sep2010/ -lparmetis -lmetis
+#MTSLIBS = -L./ParMetis-3.1-Sep2010/ -lparmetis -lmetis
 CDFLIBS = -L$(NETCDF_FORTRAN)/lib -L$(NETCDF)/lib -lnetcdf -lnetcdff
 CDFMOD = -I$(NETCDF)/include -I$(NETCDF_FORTRAN)/include
 

diff --git a/mk/Make.defs.dan.cluster b/mk/Make.defs.dan.cluster
@@ -49,7 +49,7 @@ FCPFLAGS = $(PPFLAGS) -O2 -Mlfs -tp=px #MPI code
 FLDFLAGS = -O2 #for final linking of object files
 
   #####Libraries
-MTSLIBS = -L$(PWD)/ParMetis-3.1-Sep2010 -lparmetis -lmetis
+##MTSLIBS = -L$(PWD)/ParMetis-3.1-Sep2010 -lparmetis -lmetis
 CDFLIBS = -L/opt/netcdf_pgi32/lib -lnetcdf
 CDFMOD = -I/opt/netcdf_pgi32/include # modules for netcdf
 

diff --git a/mk/Make.defs.dan.fx100 b/mk/Make.defs.dan.fx100
@@ -49,7 +49,7 @@ FCPFLAGS = $(PPFLAGS) -Kfast,autoobjstack -O2 -V -Qa,d,i,p,t,x -Koptmsg=2 -Nlst
 FLDFLAGS = -O2 -Kfast,autoobjstack  #for final linking of object files
 
   #####Libraries
-MTSLIBS = -L$(PWD)/ParMetis-3.1-Sep2010 -lparmetis -lmetis
+##MTSLIBS = -L$(PWD)/ParMetis-3.1-Sep2010 -lparmetis -lmetis
 CDFLIBS = -L/package/fx100/netcdf-3.6.3/lib -lnetcdf
 CDFMOD = -I/package/fx100/netcdf-3.6.3/include # modules for netcdf
 

diff --git a/mk/Make.defs.dkrz b/mk/Make.defs.dkrz
@@ -49,7 +49,7 @@ FCPFLAGS = $(PPFLAGS) -O2 -xCORE-AVX2 #-qopenmp
 #FCSFLAGS = $(FFCPFLAGS)
 FLDFLAGS = -O2 -xCORE-AVX2  #-qopenmp
 #####Libraries
-MTSLIBS = -L./ParMetis-3.1-Sep2010/ -lparmetis -lmetis
+##MTSLIBS = -L./ParMetis-3.1-Sep2010/ -lparmetis -lmetis
 CDFLIBS = -L/sw/rhel6-x64/netcdf/netcdf_fortran-4.4.2-intel14/lib -lnetcdff -Wl,-rpath,/sw/rhel6-x64/netcdf/netcdf_fortran-4.4.2-intel14/lib -L/sw/rhel6-x64/netcdf/netcdf_c-4.3.2-gcc48/lib -Wl,-rpath,/sw/rhel6-x64/netcdf/netcdf_c-4.3.2-gcc48/lib -L/sw/rhel6-x64/hdf5/hdf5-1.8.14-threadsafe-gcc48/lib -Wl,-rpath,/sw/rhel6-x64/hdf5/hdf5-1.8.14-threadsafe-gcc48/lib -L/sw/rhel6-x64/sys/libaec-0.3.2-gcc48/lib -Wl,-rpath,/sw/rhel6-x64/sys/libaec-0.3.2-gcc48/lib -lnetcdf -lhdf5_hl -lhdf5 -lsz -lcurl -lz -lnetcdf
 CDFMOD = -I/sw/rhel6-x64/netcdf/netcdf_fortran-4.4.2-intel14/include
 

diff --git a/mk/Make.defs.dwr.intel b/mk/Make.defs.dwr.intel
@@ -56,7 +56,7 @@ FLDFLAGS = -O2 -limf -i-static #for final linking of object files
 #FCPFLAGS    = $(PPFLAGS) -O2 -ffree-line-length-0
 #FLDFLAGS    = -O2 #for final linking of object files
 
-MTSLIBS     =  -L./ParMetis-3.1-Sep2010  -lparmetis -lmetis
+##MTSLIBS     =  -L./ParMetis-3.1-Sep2010  -lparmetis -lmetis
 CDFLIBS     = -L$N${NETCDF_FORTRAN_DIR}/lib -lnetcdff -L${NETCDF_C_DIR}/lib -lnetcdf -L${HDF5_DIR}/lib -lhdf5_hl
 CDFMOD      = -I${NETCDF_FORTRAN_DIR}/include
 USE_OPEN64 := TRUE

diff --git a/mk/Make.defs.edison b/mk/Make.defs.edison
@@ -62,7 +62,7 @@ FLDFLAGS =  #for final linking of object files
 #EXEC := $(EXEC)_OMP
 
 #Libraries
-MTSLIBS = -L./ParMetis-3.1-Sep2010.cray/ -lparmetis -lmetis
+##MTSLIBS = -L./ParMetis-3.1-Sep2010.cray/ -lparmetis -lmetis
 CDFLIBS = -L$(NETCDF)/lib -lnetcdf
 CDFMOD = -I$(NETCDF)/include/ # modules for netcdf
 

diff --git a/mk/Make.defs.fedora.gnu.ompi b/mk/Make.defs.fedora.gnu.ompi
@@ -56,7 +56,7 @@ FCPFLAGS = $(PPFLAGS) $(OPTFLAGS) -static -static-libgfortran #-g -fbacktrace #-
 FLDFLAGS = $(OPTFLAGS) #for final linking of object files
 
   #####Libraries
-MTSLIBS = -L./ParMetis-3.1-Sep2010/ -lparmetis -lmetis
+##MTSLIBS = -L./ParMetis-3.1-Sep2010/ -lparmetis -lmetis
 CDFLIBS = -L/usr/lib64/ -lnetcdf -lnetcdff
 CDFMOD = -I/usr/include/ -I/usr/lib64/gfortran/modules/ # modules for netcdf
 

diff --git a/mk/Make.defs.franzius b/mk/Make.defs.franzius
@@ -54,8 +54,7 @@ PPFLAGS := $(PPFLAGS) -DMPIVERSION=1
 FCPFLAGS = $(PPFLAGS) -O2 -assume byterecl #MPI code
 FLDFLAGS = -O2
 #####Libraries
-#MTSLIBS = -L/home/jan/ParMetis-3.1-64bit -lparmetis -lmetis
-MTSLIBS     = -L./ParMetis-3.1-Sep2010  -lparmetis -lmetis
+##MTSLIBS     = -L./ParMetis-3.1-Sep2010  -lparmetis -lmetis
 CDFLIBS = -L/home/jan/netcdf//lib/ -lnetcdf #-L/opt/intel/fce/10.1.015/lib/ -lirc
 CDFMOD = -I/home/jan/netcdf//include/ # modules for netcdf
 

diff --git a/mk/Make.defs.ivica b/mk/Make.defs.ivica
@@ -73,7 +73,7 @@ FLDFLAGS = -O2
 NC_CONFIG ?=nc-config
 NETCDF_PATH=$(shell $(NC_CONFIG) --prefix)
 METIS_PATH=./ParMetis-3.1-Sep2010
-MTSLIBS = -L$(METIS_PATH) -lparmetis -lmetis
+##MTSLIBS = -L$(METIS_PATH) -lparmetis -lmetis
 CDFLIBS = -L$(NETCDF_PATH)/lib -lnetcdf -lnetcdff
 CDFMOD = -I$(NETCDF_PATH)/include # modules for netcdf
 

diff --git a/mk/Make.defs.james b/mk/Make.defs.james
@@ -57,7 +57,7 @@ FCPFLAGS = $(PPFLAGS) -O3 -xSKYLAKE-AVX512 -mtune=skylake -fma -init=zero -align
 FLDFLAGS = -O3 -xSKYLAKE-AVX512 -mtune=skylake -fma -init=zero -align array64byte -finline-functions
 
 #####Libraries
-MTSLIBS = -L./ParMetis-3.1-Sep2010/ -lparmetis -lmetis
+##MTSLIBS = -L./ParMetis-3.1-Sep2010/ -lparmetis -lmetis
 CDFLIBS = -L$(NETCDF_FORTRAN)/lib -L$(NETCDF)/lib -lnetcdf -lnetcdff
 CDFMOD = -I$(NETCDF)/include -I$(NETCDF_FORTRAN)/include # modules for netcdf
 

diff --git a/mk/Make.defs.jeanzay b/mk/Make.defs.jeanzay
@@ -49,7 +49,7 @@ FCPFLAGS = $(PPFLAGS) $(OPTFLAGS) -static #-g -fbacktrace #-finit-real=nan -fbou
 FLDFLAGS = $(OPTFLAGS) #for final linking of object files
 
   #####Libraries
-MTSLIBS = -L./ParMetis-3.1-Sep2010/ -lparmetis -lmetis
+##MTSLIBS = -L./ParMetis-3.1-Sep2010/ -lparmetis -lmetis
 CDFLIBS = -L/gpfslocalsup/spack_soft/netcdf-fortran/4.4.5/intel-19.0.4-nm7vlsr6edc7yqkb2v7l4p6mu4dcgkoy/lib -lnetcdff -L/gpfslocalsup/spack_soft/netcdf/4.7.0/intel-19.0.4-vtvxqookplcvgsso4wqgy4neczdipgfg/lib -lnetcdf -lnetcdf -lhdf5_hl -lhdf5 -lz -lm # from nc-config
 CDFMOD = -I/gpfslocalsup/spack_soft/netcdf-fortran/4.4.5/intel-19.0.4-nm7vlsr6edc7yqkb2v7l4p6mu4dcgkoy/include # modules for netcdf
 

diff --git a/mk/Make.defs.lavezzola b/mk/Make.defs.lavezzola
@@ -52,7 +52,7 @@ PPFLAGS    := $(PPFLAGS) -DMPIVERSION=2    #-DUSE_WRAP
 FCPFLAGS    = $(PPFLAGS) -O2 -ffree-line-length-0
 FLDFLAGS    = -O2
 
-MTSLIBS     = -L./ParMetis-3.1-Sep2010  -lparmetis -lmetis
+##MTSLIBS     = -L./ParMetis-3.1-Sep2010  -lparmetis -lmetis
 CDFLIBS     = ${ANAG_NETCDF_LIB}  -lhdf5_hl ${ANAG_HDF5_LIB} 
 CDFMOD      = ${ANAG_NETCDF_INC} ${ANAG_HDF5_INC}
 USE_OPEN64 := TRUE

diff --git a/mk/Make.defs.lnec.medusa b/mk/Make.defs.lnec.medusa
@@ -50,7 +50,7 @@ PPFLAGS := $(PPFLAGS) -DMPIVERSION=2
 FCPFLAGS = $(PPFLAGS) -O2 -Bstatic -ffree-line-length-none #MPI code
 FLDFLAGS = -O2 #for final linking of object files
 #####Libraries
-MTSLIBS = -L$(PARMETIS_HOME)/lib -lparmetis -lmetis -L$(MPI_HOME)/lib -lmpi -lmpi_f90
+##MTSLIBS = -L$(PARMETIS_HOME)/lib -lparmetis -lmetis -L$(MPI_HOME)/lib -lmpi -lmpi_f90
 CDFLIBS = -L$(NETCDFHOME)/lib -lnetcdf -lnetcdff
 CDFMOD = -I$(NETCDFHOME)/include # modules for netcdf
 

diff --git a/mk/Make.defs.lnec.ws.gnu b/mk/Make.defs.lnec.ws.gnu
@@ -50,7 +50,7 @@ PPFLAGS := $(PPFLAGS) -DMPIVERSION=2
 FCPFLAGS = $(PPFLAGS) -O2 -Bstatic -ffree-line-length-none #MPI code
 FLDFLAGS = -O2 #for final linking of object files
 #####Libraries
-MTSLIBS = -L/home/share/binec/AAzevedo/SELFE_DEV/ParMetis-3.1-Sep2010 -lparmetis -lmetis -L/usr/lib64/openmpi/lib -lmpi -lmpi_f90
+##MTSLIBS = -L/home/share/binec/AAzevedo/SELFE_DEV/ParMetis-3.1-Sep2010 -lparmetis -lmetis -L/usr/lib64/openmpi/lib -lmpi -lmpi_f90
 CDFLIBS = -L/usr/lib64 -lnetcdf -lnetcdff
 CDFMOD = -I/usr/include -I/usr/lib64/gfortran/modules # modules for netcdf
 

diff --git a/mk/Make.defs.maine b/mk/Make.defs.maine
@@ -65,9 +65,7 @@ FLDFLAGS = -O2 #-mcmodel=medium -shared-intel -lmpi #for final linking of object
 #FLDFLAGS = -O2  -Mcache_align -tp nehalem -m64 #for final linking of object files
 
 #####Libraries
-##MTSLIBS = -L/sciclone/home04/yinglong/ParMetis-3.1-Sep2010 -lparmetis -lmetis
-
-MTSLIBS = -L./ParMetis-3.1-Sep2010 -lparmetis -lmetis
+##MTSLIBS = -L./ParMetis-3.1-Sep2010 -lparmetis -lmetis
 
 CDFLIBS = -L$(NETCDF_LIB_PATH) -lnetcdf
 CDFMOD = -I$(NETCDF_INC_PATH) # modules for netcdf

diff --git a/mk/Make.defs.mathieu b/mk/Make.defs.mathieu
@@ -69,8 +69,7 @@ FLDFLAGS = $(OPTFLAGS) #for final linking of object files
 
 
 #####Libraries
-#MTSLIBS = -L/usr/lib/ -lparmetis -lmetis
-MTSLIBS = -L./ParMetis-3.1-Sep2010/ -lparmetis -lmetis
+##MTSLIBS = -L./ParMetis-3.1-Sep2010/ -lparmetis -lmetis
 CDFLIBS = $(NETCDF_FORTRAN_LINK)
 CDFMOD = -I$(NETCDF_INCDIR)
 ifdef USE_GOTM

diff --git a/mk/Make.defs.pleiades b/mk/Make.defs.pleiades
@@ -67,7 +67,7 @@ FLDFLAGS = -O3 -no-prec-div -mcmodel=medium -shared-intel -ipo -axCORE-AVX512 -x
 #EXEC := $(EXEC)_OMP
 
 #Libraries
-MTSLIBS = -L./ParMetis-3.1-Sep2010/ -lparmetis -lmetis
+##MTSLIBS = -L./ParMetis-3.1-Sep2010/ -lparmetis -lmetis
 ##SLES12
 CDFLIBS = -L/nasa/netcdf/4.4.1.1_serial/lib -lnetcdf -lnetcdff 
 CDFMOD = -I/nasa/netcdf/4.4.1.1_serial/include/ # modules for netcdf

diff --git a/mk/Make.defs.pleiades_knl b/mk/Make.defs.pleiades_knl
@@ -65,7 +65,7 @@ FLDFLAGS = -g -O2 -align array64byte -no-prec-div -mcmodel=medium -shared-intel
 #EXEC := $(EXEC)_OMP
 
 #Libraries
-MTSLIBS = -L/nasa/parmetis/3.1.1/lib/ -lparmetis -lmetis
+##MTSLIBS = -L/nasa/parmetis/3.1.1/lib/ -lparmetis -lmetis
 CDFLIBS = -L/nasa/netcdf/4.4.1_serial/lib/ -lnetcdf -lnetcdff
 CDFMOD = -I/nasa/netcdf/4.4.1_serial/include/ # modules for netcdf
 

diff --git a/mk/Make.defs.sirius b/mk/Make.defs.sirius
@@ -50,7 +50,7 @@ PPFLAGS := $(PPFLAGS) -DMPIVERSION=2
 FCPFLAGS = $(PPFLAGS) -O2 -Bstatic -assume byterecl #MPI code
 FLDFLAGS = -O2 #for final linking of object files
 #####Libraries
-MTSLIBS = -L/home/users/yinglong/SELFE/ParMetis-3.1-Sep2010/ -lparmetis -lmetis
+##MTSLIBS = -L/home/users/yinglong/SELFE/ParMetis-3.1-Sep2010/ -lparmetis -lmetis
 CDFLIBS = -L/share/apps/netcdf/lib/ -lnetcdf -L/opt/intel/fce/10.1.015/lib/ -lirc
 CDFMOD = -I/share/apps/netcdf/include/ # modules for netcdf
 

diff --git a/mk/Make.defs.stampede b/mk/Make.defs.stampede
@@ -65,7 +65,7 @@ FLDFLAGS = -O1 -mcmodel=medium -shared-intel #for final linking of object files
 #FLDFLAGS = -O2 -ipo -assume buffered_io #for final linking of object files
 
 #####Libraries
-MTSLIBS = -L./ParMetis-3.1-Sep2010/ -lparmetis -lmetis
+##MTSLIBS = -L./ParMetis-3.1-Sep2010/ -lparmetis -lmetis
 
 CDFLIBS = -Wl,-rpath,${TACC_NETCDF_LIB} -L${TACC_NETCDF_LIB} -lnetcdf
 CDFMOD = -I${TACC_NETCDF_INC} # modules for netcdf

diff --git a/mk/Make.defs.stampede2 b/mk/Make.defs.stampede2
@@ -66,7 +66,7 @@ FCPFLAGS = $(PPFLAGS) -axCORE-AVX2 -O3 -no-prec-sqrt -no-prec-div -align all -as
 FLDFLAGS = -axCORE-AVX2 -O3 -no-prec-sqrt -no-prec-div -align all -assume buffered_io -assume byterecl #for final linking of object files
 
 #####Libraries
-MTSLIBS = -L./ParMetis-3.1-Sep2010.mpiicc -lparmetis -lmetis
+##MTSLIBS = -L./ParMetis-3.1-Sep2010.mpiicc -lparmetis -lmetis
 
 CDFLIBS = -Wl,-rpath,${TACC_NETCDF_LIB} -L${TACC_NETCDF_LIB} -lnetcdf -lnetcdff
 CDFMOD = -I${TACC_NETCDF_INC} # modules for netcdf

diff --git a/mk/Make.defs.tsunami b/mk/Make.defs.tsunami
@@ -60,8 +60,7 @@ FLDFLAGS = -O2 -mcmodel=medium #for final linking of object files
 #EXEC := $(EXEC)_OMP
 
 #####Libraries
-##MTSLIBS = -L/share/apps/ParMetis-3.1-Sep2010/ -lparmetis -lmetis
-MTSLIBS = -L./ParMetis-3.1-Sep2010/ -lparmetis -lmetis
+##MTSLIBS = -L./ParMetis-3.1-Sep2010/ -lparmetis -lmetis
 CDFLIBS = -L/share/apps/netcdf/lib/ -lnetcdf
 CDFMOD = -I/share/apps/netcdf/include/ # modules for netcdf
 

diff --git a/mk/Make.defs.ubuntu.gnu.mpich b/mk/Make.defs.ubuntu.gnu.mpich
@@ -64,8 +64,7 @@ FCPFLAGS = $(PPFLAGS) $(OPTFLAGS) -static -static-libgfortran #-g -fbacktrace #-
 FLDFLAGS = $(OPTFLAGS) #for final linking of object files
 
 #####Libraries
-#MTSLIBS = -L/usr/lib/ -lparmetis -lmetis
-MTSLIBS = -L./ParMetis-3.1-Sep2010 -lparmetis -lmetis
+##MTSLIBS = -L./ParMetis-3.1-Sep2010 -lparmetis -lmetis
 CDFLIBS = -L/usr/lib/ -lnetcdf -lnetcdff
 CDFMOD = -I/usr/include/ # modules for netcdf
 

diff --git a/mk/Make.defs.ubuntu.gnu.ompi b/mk/Make.defs.ubuntu.gnu.ompi
@@ -57,7 +57,7 @@ FCPFLAGS = $(PPFLAGS) $(OPTFLAGS) -static -static-libgfortran #-g -fbacktrace #-
 FLDFLAGS = $(OPTFLAGS) #for final linking of object files
 
   #####Libraries
-MTSLIBS = -L./ParMetis-3.1-Sep2010/ -lparmetis -lmetis
+##MTSLIBS = -L./ParMetis-3.1-Sep2010/ -lparmetis -lmetis
 CDFLIBS = -L/usr/lib/ -lnetcdf -lnetcdff
 CDFMOD = -I/usr/include/ # modules for netcdf