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spt.rst

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Submodules

spt.analytic_expressions

Some analytic expressions used in other submodules, e.g. fitting functions, cdf, ...

spt.analytic_expressions

spt.analyze

Further evaluate (averaging, ...) _tprops. or _tmobprops.hdf5 files, i.e. to generate end result of kinetic analysis.

spt.analyze

spt.immobile_props

Kinetic properties of picks for immobilized samples, e.g. TPP, photons, binding events, ...

spt.immobile_props

spt.linklocs

Linking of localizations into particle trajectories using trackpy.

spt.linklocs

spt.mob_props

Kinetic properties of trajectories for of mobile samples, e.g. MSD caluclation and fitting, ...

spt.mob_props

spt.motion_metrics

Numba optimized caluclation of motion metrics like MSD, MME, straightness, msd_ratio, ...

spt.motion_metrics

spt.special

Some special functions, e.g. track splitting into subtrajectories, generation of track and diffusion maps, ...

spt.special