Segmentation fault with TSNE fit_transform

[napsternxg]

I am trying the following piece of code with sklearn version 0.16.1 and am getting segmentation fault error.

>>> from sklearn.manifold import TSNE
>>> X = numpy.random.rand(10,10)
>>> t = TSNE()
>>> t.fit(X)
Segmentation fault

The same code for PCA works correctly.

>>> from sklearn.decomposition import PCA
>>> t = PCA()
>>> t.fit(X)

My library versions are:
sklearn = 0.16.1
numpy = 1.10.1
scipy = 0.16.1
OpenBLAS 0.2.16.dev

[vighneshbirodkar]

I believe the TSNE code is leaking memory.
#5689 has been a nightmare so far. I'm consistently getting an unrelated failure.

[amueller]

The code has change A LOT since 0.16.1 its a completely different algorithm. Can you try 0.17?

[napsternxg]

@amueller I cannot install 0.17 because of #5904

[olologin]

Ubuntu 15.10, Python 3.4.3, sklearn 0.17 - everything works as expected.

[napsternxg]

Updated to new version. Fixed.