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Thank you for putting together and maintaining this excellent library. It is wonderfully documented and up until now I've had no issues with it.
I recently ran into an issue when calling ripser(dX,distance_matrix=True) in a loop for a dynamical systems analysis where the application crashes due to a segmentation fault 11 error. I'm admittedly not super knowledgable about diagnosing the root cause of this type of error, but I was not able to reproduce it just by replicating the same input (30x30) matrix. The error only pops up after long runs (e.g. greater than 200 iterations).
The text was updated successfully, but these errors were encountered:
Debugging segfaults can be tough. Try running import faulthandler; faulthandler.enable() at the top of your script to get just a bit more info from segfaults. I am not a maintainer or expert on the C++ internals of this package but that may be helpful for identifying the problem.
Thank you for putting together and maintaining this excellent library. It is wonderfully documented and up until now I've had no issues with it.
I recently ran into an issue when calling ripser(dX,distance_matrix=True) in a loop for a dynamical systems analysis where the application crashes due to a segmentation fault 11 error. I'm admittedly not super knowledgable about diagnosing the root cause of this type of error, but I was not able to reproduce it just by replicating the same input (30x30) matrix. The error only pops up after long runs (e.g. greater than 200 iterations).
The text was updated successfully, but these errors were encountered: