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Thank you for the report, it is very useful for us to receive feedback!
We are aware of the problem, which shares its origin with #239 so I close this issue. Your issue will be listed in the conversation of #239 so that it will not go unseen but the discussion remains in a single issue for us. In short, some LaTeX environments have trouble in keeping "in place" and we have no good solution yet.
In https://www.scipy-lectures.org/_downloads/ScipyLectures-simple.pdf
p55
Exercise: Array creation
The code is misaligned overlapping to the bottom of the page.
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