Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Does this module run on Mac? #3

Closed
jr-leary7 opened this issue Dec 19, 2019 · 2 comments
Closed

Does this module run on Mac? #3

jr-leary7 opened this issue Dec 19, 2019 · 2 comments

Comments

@jr-leary7
Copy link

jr-leary7 commented Dec 19, 2019

When running DCS.process(my_df), I get this error: AttributeError: module "time" has no attribute "thread_time". From this link I see that thread_time() is available with Python >= 3.7, on systems Windows/Linux/Unix systems that support CLOCK_THREAD_CPUTIME_ID. However, I can't find anything regarding whether or not the Unix system that MacOS is built on supports that specific C++ function. Have you personally run DCS.process() on a Mac machine / do you know of users that have successfully done so? If not, I'll assume that for now I won't be able to use this module.

@sdomanskyi
Copy link
Owner

The latest version of DigitalCellSorter has been extensively used with Windows and Linux operating systems. On MacOS the latest version of the package had been tested for installation only.

I have added the following note in the main readme.md:

Note: We are currently preparing a manuscript describing the toolkit located this repository. If you want to access the package detailed in our latest publication of Polled Digital Cell Sorter go to https://zenodo.org/record/2603265 and download the package (v1.1).

@jr-leary7
Copy link
Author

Through StackOverflow it's been determined that the CLOCK_THREAD_CPUTIME C++ function isn't available on Mac systems, thus DCS.process() will not run.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

2 participants