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Error in getLRR function #1

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jtorrejon81 opened this issue Dec 2, 2020 · 0 comments
Open

Error in getLRR function #1

jtorrejon81 opened this issue Dec 2, 2020 · 0 comments

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@jtorrejon81
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Hi,

I have just installed Epicopy and EpicopyData packages, but I get an error in getLRR function.
I tried first with Normals samples in Epicopy package

epi_lrr <- getLRR(rgSet = RGset_tumor, Normals = NA, Ref = 'median')

and then pre-processing Normal samples from minfiData package and creating a second RGset object related to these Normal samples.

epi_lrr <- getLRR(rgSet = RGset_tumor, Normals = RGset_normal, Ref = 'median')

But I got same error in both cases

"Error in (function (classes, fdef, mtable) :
unable to find an inherited method for function ‘pData<-’ for signature ‘"RGChannelSet", "data.frame"’

Do you know how to fix this this problem?
Thank you very much in advance
Best regards,
Jacob
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