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Estimate confidence intervals in kaplan_meier_estimator #348

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merged 7 commits into from Apr 2, 2023

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sebp
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@sebp sebp commented Apr 1, 2023

Checklist

  • pytest passes
  • tests are included
  • code is well formatted
  • documentation renders correctly

What does this implement/fix? Explain your changes

Implement estimating confidence intervals in kaplan_meier_estimator using the log-minus-log transformation.

Based on #320

@sebp sebp changed the title Estimate confidence invervals in kaplan_meier_estimator Estimate confidence intervals in kaplan_meier_estimator Apr 1, 2023
@sebp sebp force-pushed the kaplan-meier-variance branch 2 times, most recently from b7c05bd to d470e01 Compare April 1, 2023 19:42
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codecov bot commented Apr 1, 2023

Codecov Report

Patch coverage: 100.00% and project coverage change: +0.02 🎉

Comparison is base (7b2e017) 97.85% compared to head (1364458) 97.88%.

Additional details and impacted files
@@            Coverage Diff             @@
##           master     #348      +/-   ##
==========================================
+ Coverage   97.85%   97.88%   +0.02%     
==========================================
  Files          37       37              
  Lines        3270     3315      +45     
  Branches      496      451      -45     
==========================================
+ Hits         3200     3245      +45     
  Misses         33       33              
  Partials       37       37              
Impacted Files Coverage Δ
sksurv/nonparametric.py 98.95% <100.00%> (+0.31%) ⬆️

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@sebp sebp merged commit d82e9be into master Apr 2, 2023
29 checks passed
@sebp sebp deleted the kaplan-meier-variance branch April 2, 2023 10:22
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2 participants