iris.ipynb

{
 "cells": [
  {
   "cell_type": "code",
   "execution_count": 1,
   "metadata": {},
   "outputs": [],
   "source": [
    "# Author : Amir Shokri\n",
    "# github link : https://github.com/amirshnll/iris\n",
    "# dataset link : http://archive.ics.uci.edu/ml/datasets/Iris\n",
    "# email : amirsh.nll@gmail.com"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 1,
   "metadata": {},
   "outputs": [],
   "source": [
    "import pandas as pd"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 5,
   "metadata": {},
   "outputs": [
    {
     "data": {
      "text/html": [
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       "\n",
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       "    }\n",
       "\n",
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       "<table border=\"1\" class=\"dataframe\">\n",
       "  <thead>\n",
       "    <tr style=\"text-align: right;\">\n",
       "      <th></th>\n",
       "      <th>0</th>\n",
       "      <th>1</th>\n",
       "      <th>2</th>\n",
       "      <th>3</th>\n",
       "      <th>4</th>\n",
       "    </tr>\n",
       "  </thead>\n",
       "  <tbody>\n",
       "    <tr>\n",
       "      <th>0</th>\n",
       "      <td>5.1</td>\n",
       "      <td>3.5</td>\n",
       "      <td>1.4</td>\n",
       "      <td>0.2</td>\n",
       "      <td>Iris-setosa</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>1</th>\n",
       "      <td>4.9</td>\n",
       "      <td>3.0</td>\n",
       "      <td>1.4</td>\n",
       "      <td>0.2</td>\n",
       "      <td>Iris-setosa</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>2</th>\n",
       "      <td>4.7</td>\n",
       "      <td>3.2</td>\n",
       "      <td>1.3</td>\n",
       "      <td>0.2</td>\n",
       "      <td>Iris-setosa</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>3</th>\n",
       "      <td>4.6</td>\n",
       "      <td>3.1</td>\n",
       "      <td>1.5</td>\n",
       "      <td>0.2</td>\n",
       "      <td>Iris-setosa</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>4</th>\n",
       "      <td>5.0</td>\n",
       "      <td>3.6</td>\n",
       "      <td>1.4</td>\n",
       "      <td>0.2</td>\n",
       "      <td>Iris-setosa</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>...</th>\n",
       "      <td>...</td>\n",
       "      <td>...</td>\n",
       "      <td>...</td>\n",
       "      <td>...</td>\n",
       "      <td>...</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>145</th>\n",
       "      <td>6.7</td>\n",
       "      <td>3.0</td>\n",
       "      <td>5.2</td>\n",
       "      <td>2.3</td>\n",
       "      <td>Iris-virginica</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>146</th>\n",
       "      <td>6.3</td>\n",
       "      <td>2.5</td>\n",
       "      <td>5.0</td>\n",
       "      <td>1.9</td>\n",
       "      <td>Iris-virginica</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>147</th>\n",
       "      <td>6.5</td>\n",
       "      <td>3.0</td>\n",
       "      <td>5.2</td>\n",
       "      <td>2.0</td>\n",
       "      <td>Iris-virginica</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>148</th>\n",
       "      <td>6.2</td>\n",
       "      <td>3.4</td>\n",
       "      <td>5.4</td>\n",
       "      <td>2.3</td>\n",
       "      <td>Iris-virginica</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>149</th>\n",
       "      <td>5.9</td>\n",
       "      <td>3.0</td>\n",
       "      <td>5.1</td>\n",
       "      <td>1.8</td>\n",
       "      <td>Iris-virginica</td>\n",
       "    </tr>\n",
       "  </tbody>\n",
       "</table>\n",
       "<p>150 rows × 5 columns</p>\n",
       "</div>"
      ],
      "text/plain": [
       "       0    1    2    3               4\n",
       "0    5.1  3.5  1.4  0.2     Iris-setosa\n",
       "1    4.9  3.0  1.4  0.2     Iris-setosa\n",
       "2    4.7  3.2  1.3  0.2     Iris-setosa\n",
       "3    4.6  3.1  1.5  0.2     Iris-setosa\n",
       "4    5.0  3.6  1.4  0.2     Iris-setosa\n",
       "..   ...  ...  ...  ...             ...\n",
       "145  6.7  3.0  5.2  2.3  Iris-virginica\n",
       "146  6.3  2.5  5.0  1.9  Iris-virginica\n",
       "147  6.5  3.0  5.2  2.0  Iris-virginica\n",
       "148  6.2  3.4  5.4  2.3  Iris-virginica\n",
       "149  5.9  3.0  5.1  1.8  Iris-virginica\n",
       "\n",
       "[150 rows x 5 columns]"
      ]
     },
     "execution_count": 5,
     "metadata": {},
     "output_type": "execute_result"
    }
   ],
   "source": [
    "data = pd.read_csv('iris.csv', header=None)\n",
    "data"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 4,
   "metadata": {},
   "outputs": [
    {
     "data": {
      "text/html": [
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       "        vertical-align: middle;\n",
       "    }\n",
       "\n",
       "    .dataframe tbody tr th {\n",
       "        vertical-align: top;\n",
       "    }\n",
       "\n",
       "    .dataframe thead th {\n",
       "        text-align: right;\n",
       "    }\n",
       "</style>\n",
       "<table border=\"1\" class=\"dataframe\">\n",
       "  <thead>\n",
       "    <tr style=\"text-align: right;\">\n",
       "      <th></th>\n",
       "      <th>0</th>\n",
       "      <th>1</th>\n",
       "      <th>2</th>\n",
       "      <th>3</th>\n",
       "    </tr>\n",
       "  </thead>\n",
       "  <tbody>\n",
       "    <tr>\n",
       "      <th>count</th>\n",
       "      <td>150.000000</td>\n",
       "      <td>150.000000</td>\n",
       "      <td>150.000000</td>\n",
       "      <td>150.000000</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>mean</th>\n",
       "      <td>5.843333</td>\n",
       "      <td>3.054000</td>\n",
       "      <td>3.758667</td>\n",
       "      <td>1.198667</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>std</th>\n",
       "      <td>0.828066</td>\n",
       "      <td>0.433594</td>\n",
       "      <td>1.764420</td>\n",
       "      <td>0.763161</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>min</th>\n",
       "      <td>4.300000</td>\n",
       "      <td>2.000000</td>\n",
       "      <td>1.000000</td>\n",
       "      <td>0.100000</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>25%</th>\n",
       "      <td>5.100000</td>\n",
       "      <td>2.800000</td>\n",
       "      <td>1.600000</td>\n",
       "      <td>0.300000</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>50%</th>\n",
       "      <td>5.800000</td>\n",
       "      <td>3.000000</td>\n",
       "      <td>4.350000</td>\n",
       "      <td>1.300000</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>75%</th>\n",
       "      <td>6.400000</td>\n",
       "      <td>3.300000</td>\n",
       "      <td>5.100000</td>\n",
       "      <td>1.800000</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>max</th>\n",
       "      <td>7.900000</td>\n",
       "      <td>4.400000</td>\n",
       "      <td>6.900000</td>\n",
       "      <td>2.500000</td>\n",
       "    </tr>\n",
       "  </tbody>\n",
       "</table>\n",
       "</div>"
      ],
      "text/plain": [
       "                0           1           2           3\n",
       "count  150.000000  150.000000  150.000000  150.000000\n",
       "mean     5.843333    3.054000    3.758667    1.198667\n",
       "std      0.828066    0.433594    1.764420    0.763161\n",
       "min      4.300000    2.000000    1.000000    0.100000\n",
       "25%      5.100000    2.800000    1.600000    0.300000\n",
       "50%      5.800000    3.000000    4.350000    1.300000\n",
       "75%      6.400000    3.300000    5.100000    1.800000\n",
       "max      7.900000    4.400000    6.900000    2.500000"
      ]
     },
     "execution_count": 4,
     "metadata": {},
     "output_type": "execute_result"
    }
   ],
   "source": [
    "data.describe()"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 6,
   "metadata": {},
   "outputs": [],
   "source": [
    "x = data[data.columns[:4]]\n",
    "Y = data[data.columns[4]]"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 7,
   "metadata": {},
   "outputs": [],
   "source": [
    "from sklearn.preprocessing import StandardScaler\n",
    "scaler = StandardScaler()\n",
    "scaled_x = scaler.fit_transform(x)"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 9,
   "metadata": {},
   "outputs": [
    {
     "data": {
      "text/plain": [
       "<matplotlib.axes._subplots.AxesSubplot at 0x1f0814984c8>"
      ]
     },
     "execution_count": 9,
     "metadata": {},
     "output_type": "execute_result"
    },
    {
     "data": {
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       "    </g>\r\n",
       "   </g>\r\n",
       "  </g>\r\n",
       " </g>\r\n",
       "</svg>\r\n"
      ],
      "text/plain": [
       "<Figure size 432x288 with 1 Axes>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    }
   ],
   "source": [
    "Y.value_counts().plot.pie()"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 11,
   "metadata": {},
   "outputs": [],
   "source": [
    "from sklearn.model_selection import train_test_split\n",
    "X_train, X_test, y_train, y_test = train_test_split(scaled_x, Y, test_size=0.3, random_state=0)"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 12,
   "metadata": {},
   "outputs": [],
   "source": [
    "from sklearn.metrics import f1_score\n",
    "from sklearn.metrics import accuracy_score"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 14,
   "metadata": {},
   "outputs": [
    {
     "name": "stdout",
     "output_type": "stream",
     "text": [
      "0.9777777777777777\n",
      "0.9777777777777777\n"
     ]
    }
   ],
   "source": [
    "from sklearn.tree import DecisionTreeClassifier\n",
    "clf = DecisionTreeClassifier()\n",
    "clf.fit(X_train, y_train)\n",
    "y_pred = clf.predict(X_test)\n",
    "print(accuracy_score(y_test, y_pred))\n",
    "print(f1_score(y_test, y_pred, average='micro'))"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 15,
   "metadata": {},
   "outputs": [
    {
     "name": "stdout",
     "output_type": "stream",
     "text": [
      "0.9777777777777777\n",
      "0.9777777777777777\n"
     ]
    }
   ],
   "source": [
    "from sklearn.neighbors import KNeighborsClassifier\n",
    "clf = KNeighborsClassifier()\n",
    "clf.fit(X_train, y_train)\n",
    "y_pred = clf.predict(X_test)\n",
    "print(accuracy_score(y_test, y_pred))\n",
    "print(f1_score(y_test, y_pred, average='micro'))"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 16,
   "metadata": {},
   "outputs": [
    {
     "name": "stdout",
     "output_type": "stream",
     "text": [
      "1.0\n",
      "1.0\n"
     ]
    }
   ],
   "source": [
    "from sklearn.naive_bayes import GaussianNB\n",
    "clf = GaussianNB()\n",
    "clf.fit(X_train, y_train)\n",
    "y_pred = clf.predict(X_test)\n",
    "print(accuracy_score(y_test, y_pred))\n",
    "print(f1_score(y_test, y_pred, average='micro'))"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 17,
   "metadata": {},
   "outputs": [
    {
     "name": "stdout",
     "output_type": "stream",
     "text": [
      "0.9777777777777777\n",
      "0.9777777777777777\n"
     ]
    }
   ],
   "source": [
    "from sklearn.neural_network import MLPClassifier\n",
    "clf = MLPClassifier(hidden_layer_sizes=(100,))\n",
    "clf.fit(X_train, y_train)\n",
    "y_pred = clf.predict(X_test)\n",
    "print(accuracy_score(y_test, y_pred))\n",
    "print(f1_score(y_test, y_pred, average='micro'))"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 19,
   "metadata": {},
   "outputs": [
    {
     "name": "stdout",
     "output_type": "stream",
     "text": [
      "0.9777777777777777\n",
      "0.9777777777777777\n"
     ]
    }
   ],
   "source": [
    "from sklearn.linear_model import LogisticRegression\n",
    "clf = LogisticRegression()\n",
    "clf.fit(X_train, y_train)\n",
    "y_pred = clf.predict(X_test)\n",
    "print(accuracy_score(y_test, y_pred))\n",
    "print(f1_score(y_test, y_pred, average='micro'))"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": null,
   "metadata": {},
   "outputs": [],
   "source": []
  }
 ],
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