A computer vision algorithm was built for the purpose of identifying individual synovial nuclei in hematoxylin and esoin stained histological images.
To use the algorithm, the following pieces of computer software are required:
- A computer with any operating system (Windows, Linux, or MacOS)
- Python 3.0+
- skimage
- numpy
- matplotlib
After downloading the required Python libraries, the algorithm can be applied to the image as described in the tutorial python notebook.
segment.py- contains functions relevant for nuclei segmentationtutorial.ipynb- contains an example for identifying nucleiexample_image.jpg- example image provided for tutorial
Copyright 2021, The MITRE Corporation Approved for Public Release; Distribution Unlimited. Case Number 21-0081.
Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. You may obtain a copy of the License at
http://www.apache.org/licenses/LICENSE-2.0
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