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slurm and space #9

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mihinduk opened this issue Oct 2, 2020 · 0 comments
Closed

slurm and space #9

mihinduk opened this issue Oct 2, 2020 · 0 comments
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@linsalrob

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@mihinduk
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mihinduk commented Oct 2, 2020

Hi Rob,

I am not sure if this will happen with Snakemake, but if I run out of space on the server and contaminant removal quits after sample 42 of 527, because those 42 completed, it exits with status 0 and no out of space message.

Kathie
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