/
container.yaml
60 lines (60 loc) · 2.86 KB
/
container.yaml
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url: https://biocontainers.pro/tools/gmwi2
maintainer: '@vsoch'
description: singularity registry hpc automated addition for gmwi2
latest:
1.5--pyhdfd78af_0: sha256:e9e7dc48cab545f92e94daae72816d657924e3968380b8d5c1e614c1ccf2f4b5
tags:
1.4--pyhdfd78af_0: sha256:e6a5e094cd33856dd5af6f7b2328abf7571df5b54eed80b77b5ec294af2d9dd5
1.5--pyhdfd78af_0: sha256:e9e7dc48cab545f92e94daae72816d657924e3968380b8d5c1e614c1ccf2f4b5
docker: quay.io/biocontainers/gmwi2
aliases:
add_metadata_tree.py: /usr/local/bin/add_metadata_tree.py
blastn_vdb: /usr/local/bin/blastn_vdb
breadth_depth.py: /usr/local/bin/breadth_depth.py
consensus.py: /usr/local/bin/consensus.py
consensus_aDNA.py: /usr/local/bin/consensus_aDNA.py
extract_markers.py: /usr/local/bin/extract_markers.py
gmwi2: /usr/local/bin/gmwi2
merge_metaphlan_tables.py: /usr/local/bin/merge_metaphlan_tables.py
metaphlan: /usr/local/bin/metaphlan
phylophlan: /usr/local/bin/phylophlan
phylophlan_draw_metagenomic: /usr/local/bin/phylophlan_draw_metagenomic
phylophlan_get_reference: /usr/local/bin/phylophlan_get_reference
phylophlan_metagenomic: /usr/local/bin/phylophlan_metagenomic
phylophlan_setup_database: /usr/local/bin/phylophlan_setup_database
phylophlan_strain_finder: /usr/local/bin/phylophlan_strain_finder
phylophlan_write_config_file: /usr/local/bin/phylophlan_write_config_file
phylophlan_write_default_configs.sh: /usr/local/bin/phylophlan_write_default_configs.sh
plot_tree_graphlan.py: /usr/local/bin/plot_tree_graphlan.py
poly.py: /usr/local/bin/poly.py
polymut.py: /usr/local/bin/polymut.py
read_fastx.py: /usr/local/bin/read_fastx.py
sample2markers.py: /usr/local/bin/sample2markers.py
strain_transmission.py: /usr/local/bin/strain_transmission.py
strainphlan: /usr/local/bin/strainphlan
tblastn_vdb: /usr/local/bin/tblastn_vdb
iqtree2: /usr/local/bin/iqtree2
readal: /usr/local/bin/readal
statal: /usr/local/bin/statal
trimal: /usr/local/bin/trimal
h5delete: /usr/local/bin/h5delete
iqtree: /usr/local/bin/iqtree
biom: /usr/local/bin/biom
raxmlHPC: /usr/local/bin/raxmlHPC
raxmlHPC-AVX2: /usr/local/bin/raxmlHPC-AVX2
raxmlHPC-PTHREADS: /usr/local/bin/raxmlHPC-PTHREADS
raxmlHPC-PTHREADS-AVX2: /usr/local/bin/raxmlHPC-PTHREADS-AVX2
raxmlHPC-PTHREADS-SSE3: /usr/local/bin/raxmlHPC-PTHREADS-SSE3
raxmlHPC-SSE3: /usr/local/bin/raxmlHPC-SSE3
hwloc-gather-cpuid: /usr/local/bin/hwloc-gather-cpuid
hwloc-annotate: /usr/local/bin/hwloc-annotate
hwloc-bind: /usr/local/bin/hwloc-bind
hwloc-calc: /usr/local/bin/hwloc-calc
hwloc-compress-dir: /usr/local/bin/hwloc-compress-dir
hwloc-diff: /usr/local/bin/hwloc-diff
hwloc-distrib: /usr/local/bin/hwloc-distrib
hwloc-gather-topology: /usr/local/bin/hwloc-gather-topology
hwloc-info: /usr/local/bin/hwloc-info
hwloc-ls: /usr/local/bin/hwloc-ls
hwloc-patch: /usr/local/bin/hwloc-patch
hwloc-ps: /usr/local/bin/hwloc-ps