/
container.yaml
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/
container.yaml
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url: https://biocontainers.pro/tools/kingfisher
maintainer: '@vsoch'
description: singularity registry hpc automated addition for kingfisher
latest:
0.4.1--pyh7cba7a3_0: sha256:e909ea537b44981c1ab54a8a0f161a32f76e1c46ffcea794b3b893d0ee3ccb45
tags:
0.1.2--pyh7cba7a3_0: sha256:19756425a4260580b5df4eac36646d4bbc1888268d3511dc85614092d5700954
0.2.1--pyh7cba7a3_1: sha256:9fd674654a25be5adba3e73a29590c39aca746b126d17f0c1de89043d30cbb21
0.2.2--pyh7cba7a3_0: sha256:3312717e9194edf9d22c7a785ef5b07475bf330510b07efc42f4c81b54430308
0.3.1--pyh7cba7a3_0: sha256:ce114f8477fc56e9efe87f399c0c228b06bb47ab3dee3924baf26db11da995cb
0.4.1--pyh7cba7a3_0: sha256:e909ea537b44981c1ab54a8a0f161a32f76e1c46ffcea794b3b893d0ee3ccb45
docker: quay.io/biocontainers/kingfisher
aliases:
abi-dump.3: /usr/local/bin/abi-dump.3
abi-dump.3.0.0: /usr/local/bin/abi-dump.3.0.0
abi-load: /usr/local/bin/abi-load
abi-load.3: /usr/local/bin/abi-load.3
abi-load.3.0.0: /usr/local/bin/abi-load.3.0.0
align-cache.3: /usr/local/bin/align-cache.3
align-cache.3.0.0: /usr/local/bin/align-cache.3.0.0
align-info.3: /usr/local/bin/align-info.3
align-info.3.0.0: /usr/local/bin/align-info.3.0.0
aria2c: /usr/local/bin/aria2c
aws: /usr/local/bin/aws
aws.cmd: /usr/local/bin/aws.cmd
aws_bash_completer: /usr/local/bin/aws_bash_completer
aws_completer: /usr/local/bin/aws_completer
aws_zsh_completer.sh: /usr/local/bin/aws_zsh_completer.sh
bam-load.3: /usr/local/bin/bam-load.3
bam-load.3.0.0: /usr/local/bin/bam-load.3.0.0
cache-mgr.3: /usr/local/bin/cache-mgr.3
cache-mgr.3.0.0: /usr/local/bin/cache-mgr.3.0.0
ccextract: /usr/local/bin/ccextract
ccextract.3: /usr/local/bin/ccextract.3
ccextract.3.0.0: /usr/local/bin/ccextract.3.0.0
cg-load.3: /usr/local/bin/cg-load.3
cg-load.3.0.0: /usr/local/bin/cg-load.3.0.0
check-corrupt: /usr/local/bin/check-corrupt
check-corrupt.3: /usr/local/bin/check-corrupt.3
check-corrupt.3.0.0: /usr/local/bin/check-corrupt.3.0.0
copycat: /usr/local/bin/copycat
copycat.3: /usr/local/bin/copycat.3
copycat.3.0.0: /usr/local/bin/copycat.3.0.0
crc32sum: /usr/local/bin/crc32sum
crc32sum.3: /usr/local/bin/crc32sum.3
crc32sum.3.0.0: /usr/local/bin/crc32sum.3.0.0
csv-import: /usr/local/bin/csv-import
dump-blob-boundaries: /usr/local/bin/dump-blob-boundaries
dump-blob-boundaries.3: /usr/local/bin/dump-blob-boundaries.3
dump-blob-boundaries.3.0.0: /usr/local/bin/dump-blob-boundaries.3.0.0
elasticurl: /usr/local/bin/elasticurl
elasticurl_cpp: /usr/local/bin/elasticurl_cpp
elastipubsub: /usr/local/bin/elastipubsub
f2py3.11: /usr/local/bin/f2py3.11
fastconv: /usr/local/bin/fastconv
fastconv.3: /usr/local/bin/fastconv.3
fastconv.3.0.0: /usr/local/bin/fastconv.3.0.0
fasterq-dump-orig.3.0.0: /usr/local/bin/fasterq-dump-orig.3.0.0
fasterq-dump.3: /usr/local/bin/fasterq-dump.3
fasterq-dump.3.0.0: /usr/local/bin/fasterq-dump.3.0.0
fastq-dump-orig.3.0.0: /usr/local/bin/fastq-dump-orig.3.0.0
fastq-dump.3: /usr/local/bin/fastq-dump.3
fastq-dump.3.0.0: /usr/local/bin/fastq-dump.3.0.0
fastq-load: /usr/local/bin/fastq-load
fastq-load.3: /usr/local/bin/fastq-load.3
fastq-load.3.0.0: /usr/local/bin/fastq-load.3.0.0
helicos-load: /usr/local/bin/helicos-load
helicos-load.3: /usr/local/bin/helicos-load.3
helicos-load.3.0.0: /usr/local/bin/helicos-load.3.0.0
illumina-dump.3: /usr/local/bin/illumina-dump.3
illumina-dump.3.0.0: /usr/local/bin/illumina-dump.3.0.0
illumina-load: /usr/local/bin/illumina-load
illumina-load.3: /usr/local/bin/illumina-load.3
illumina-load.3.0.0: /usr/local/bin/illumina-load.3.0.0
kar+: /usr/local/bin/kar+
kar+.3: /usr/local/bin/kar+.3
kar+.3.0.0: /usr/local/bin/kar+.3.0.0
kar+meta: /usr/local/bin/kar+meta
kar+meta.3: /usr/local/bin/kar+meta.3
kar+meta.3.0.0: /usr/local/bin/kar+meta.3.0.0
kar.3: /usr/local/bin/kar.3
kar.3.0.0: /usr/local/bin/kar.3.0.0
kdb-index: /usr/local/bin/kdb-index
kdb-index.3: /usr/local/bin/kdb-index.3
kdb-index.3.0.0: /usr/local/bin/kdb-index.3.0.0
kdbmeta.3: /usr/local/bin/kdbmeta.3
kdbmeta.3.0.0: /usr/local/bin/kdbmeta.3.0.0
kingfisher: /usr/local/bin/kingfisher
latf-load.3: /usr/local/bin/latf-load.3
latf-load.3.0.0: /usr/local/bin/latf-load.3.0.0
make-read-filter: /usr/local/bin/make-read-filter
make-read-filter.3: /usr/local/bin/make-read-filter.3
make-read-filter.3.0.0: /usr/local/bin/make-read-filter.3.0.0
md5cp.3: /usr/local/bin/md5cp.3
md5cp.3.0.0: /usr/local/bin/md5cp.3.0.0
ngs-pileup: /usr/local/bin/ngs-pileup
ngs-pileup.3: /usr/local/bin/ngs-pileup.3
ngs-pileup.3.0.0: /usr/local/bin/ngs-pileup.3.0.0
orc-memory: /usr/local/bin/orc-memory
orc-scan: /usr/local/bin/orc-scan
pacbio-correct: /usr/local/bin/pacbio-correct
pacbio-correct.3: /usr/local/bin/pacbio-correct.3
pacbio-correct.3.0.0: /usr/local/bin/pacbio-correct.3.0.0
pacbio-load: /usr/local/bin/pacbio-load
pacbio-load.3: /usr/local/bin/pacbio-load.3
pacbio-load.3.0.0: /usr/local/bin/pacbio-load.3.0.0
pacbio-loadxml: /usr/local/bin/pacbio-loadxml
pacbio-loadxml.3: /usr/local/bin/pacbio-loadxml.3
pacbio-loadxml.3.0.0: /usr/local/bin/pacbio-loadxml.3.0.0
prefetch-orig.3.0.0: /usr/local/bin/prefetch-orig.3.0.0
prefetch.3: /usr/local/bin/prefetch.3
prefetch.3.0.0: /usr/local/bin/prefetch.3.0.0
produce_x_platform_fuzz_corpus: /usr/local/bin/produce_x_platform_fuzz_corpus
qual-recalib-stat: /usr/local/bin/qual-recalib-stat
qual-recalib-stat.3: /usr/local/bin/qual-recalib-stat.3
qual-recalib-stat.3.0.0: /usr/local/bin/qual-recalib-stat.3.0.0
rcexplain.3: /usr/local/bin/rcexplain.3
rcexplain.3.0.0: /usr/local/bin/rcexplain.3.0.0
read-filter-redact.3: /usr/local/bin/read-filter-redact.3
read-filter-redact.3.0.0: /usr/local/bin/read-filter-redact.3.0.0
rowwritetest: /usr/local/bin/rowwritetest
rowwritetest.3: /usr/local/bin/rowwritetest.3
rowwritetest.3.0.0: /usr/local/bin/rowwritetest.3.0.0
run_x_platform_fuzz_corpus: /usr/local/bin/run_x_platform_fuzz_corpus
sam-dump-orig.3.0.0: /usr/local/bin/sam-dump-orig.3.0.0
sam-dump.3: /usr/local/bin/sam-dump.3
sam-dump.3.0.0: /usr/local/bin/sam-dump.3.0.0
samview: /usr/local/bin/samview
samview-util: /usr/local/bin/samview-util
samview-util.3: /usr/local/bin/samview-util.3
samview-util.3.0.0: /usr/local/bin/samview-util.3.0.0
samview.3: /usr/local/bin/samview.3
samview.3.0.0: /usr/local/bin/samview.3.0.0
schema-replace: /usr/local/bin/schema-replace
schema-replace.3: /usr/local/bin/schema-replace.3
schema-replace.3.0.0: /usr/local/bin/schema-replace.3.0.0
sff-dump.3: /usr/local/bin/sff-dump.3
sff-dump.3.0.0: /usr/local/bin/sff-dump.3.0.0
sff-load: /usr/local/bin/sff-load
sff-load.3: /usr/local/bin/sff-load.3
sff-load.3.0.0: /usr/local/bin/sff-load.3.0.0
sharq: /usr/local/bin/sharq
sharq.3: /usr/local/bin/sharq.3
sharq.3.0.0: /usr/local/bin/sharq.3.0.0
sortreadtest: /usr/local/bin/sortreadtest
sortreadtest.3: /usr/local/bin/sortreadtest.3
sortreadtest.3.0.0: /usr/local/bin/sortreadtest.3.0.0
sra-pileup-orig.3.0.0: /usr/local/bin/sra-pileup-orig.3.0.0
sra-pileup.3: /usr/local/bin/sra-pileup.3
sra-pileup.3.0.0: /usr/local/bin/sra-pileup.3.0.0
sra-sort-cg.3: /usr/local/bin/sra-sort-cg.3
sra-sort-cg.3.0.0: /usr/local/bin/sra-sort-cg.3.0.0
sra-sort.3: /usr/local/bin/sra-sort.3
sra-sort.3.0.0: /usr/local/bin/sra-sort.3.0.0
sra-stat.3: /usr/local/bin/sra-stat.3
sra-stat.3.0.0: /usr/local/bin/sra-stat.3.0.0
sracat: /usr/local/bin/sracat
srapath-orig.3.0.0: /usr/local/bin/srapath-orig.3.0.0
srapath.3: /usr/local/bin/srapath.3
srapath.3.0.0: /usr/local/bin/srapath.3.0.0
sratools.3: /usr/local/bin/sratools.3
sratools.3.0.0: /usr/local/bin/sratools.3.0.0
srf-load: /usr/local/bin/srf-load
srf-load.3: /usr/local/bin/srf-load.3
srf-load.3.0.0: /usr/local/bin/srf-load.3.0.0
test-download: /usr/local/bin/test-download
test-download.3: /usr/local/bin/test-download.3
test-download.3.0.0: /usr/local/bin/test-download.3.0.0
test-read-write-cursor: /usr/local/bin/test-read-write-cursor
test-read-write-cursor.3: /usr/local/bin/test-read-write-cursor.3
test-read-write-cursor.3.0.0: /usr/local/bin/test-read-write-cursor.3.0.0
test-sra.3: /usr/local/bin/test-sra.3
test-sra.3.0.0: /usr/local/bin/test-sra.3.0.0
testld: /usr/local/bin/testld
testld.3: /usr/local/bin/testld.3
testld.3.0.0: /usr/local/bin/testld.3.0.0
timezone-dump: /usr/local/bin/timezone-dump
txt2kdb: /usr/local/bin/txt2kdb
txt2kdb.3: /usr/local/bin/txt2kdb.3
txt2kdb.3.0.0: /usr/local/bin/txt2kdb.3.0.0
vdb-config.3: /usr/local/bin/vdb-config.3
vdb-config.3.0.0: /usr/local/bin/vdb-config.3.0.0
vdb-copy.3: /usr/local/bin/vdb-copy.3
vdb-copy.3.0.0: /usr/local/bin/vdb-copy.3.0.0
vdb-decrypt.3: /usr/local/bin/vdb-decrypt.3
vdb-decrypt.3.0.0: /usr/local/bin/vdb-decrypt.3.0.0
vdb-diff.3: /usr/local/bin/vdb-diff.3
vdb-diff.3.0.0: /usr/local/bin/vdb-diff.3.0.0
vdb-dump-orig.3.0.0: /usr/local/bin/vdb-dump-orig.3.0.0
vdb-dump.3: /usr/local/bin/vdb-dump.3
vdb-dump.3.0.0: /usr/local/bin/vdb-dump.3.0.0
vdb-encrypt.3: /usr/local/bin/vdb-encrypt.3
vdb-encrypt.3.0.0: /usr/local/bin/vdb-encrypt.3.0.0
vdb-get: /usr/local/bin/vdb-get
vdb-get.3: /usr/local/bin/vdb-get.3
vdb-get.3.0.0: /usr/local/bin/vdb-get.3.0.0
vdb-lock.3: /usr/local/bin/vdb-lock.3
vdb-lock.3.0.0: /usr/local/bin/vdb-lock.3.0.0
vdb-passwd.3: /usr/local/bin/vdb-passwd.3
vdb-passwd.3.0.0: /usr/local/bin/vdb-passwd.3.0.0
vdb-sql: /usr/local/bin/vdb-sql
vdb-sql.3: /usr/local/bin/vdb-sql.3
vdb-sql.3.0.0: /usr/local/bin/vdb-sql.3.0.0
vdb-unlock.3: /usr/local/bin/vdb-unlock.3
vdb-unlock.3.0.0: /usr/local/bin/vdb-unlock.3.0.0
vdb-validate.3: /usr/local/bin/vdb-validate.3
vdb-validate.3.0.0: /usr/local/bin/vdb-validate.3.0.0
2to3-3.11: /usr/local/bin/2to3-3.11
idle3.11: /usr/local/bin/idle3.11
pydoc3.11: /usr/local/bin/pydoc3.11
python3.11: /usr/local/bin/python3.11
python3.11-config: /usr/local/bin/python3.11-config
align-cache: /usr/local/bin/align-cache
fasterq-dump-orig: /usr/local/bin/fasterq-dump-orig
fastq-dump-orig: /usr/local/bin/fastq-dump-orig
md5cp: /usr/local/bin/md5cp
prefetch-orig: /usr/local/bin/prefetch-orig
read-filter-redact: /usr/local/bin/read-filter-redact
sam-dump-orig: /usr/local/bin/sam-dump-orig
sra-pileup-orig: /usr/local/bin/sra-pileup-orig
sra-sort-cg: /usr/local/bin/sra-sort-cg
srapath-orig: /usr/local/bin/srapath-orig
vdb-diff: /usr/local/bin/vdb-diff
orc-contents: /usr/local/bin/orc-contents
orc-metadata: /usr/local/bin/orc-metadata
orc-statistics: /usr/local/bin/orc-statistics
plasma-store-server: /usr/local/bin/plasma-store-server
plasma_store: /usr/local/bin/plasma_store
sha256_profile: /usr/local/bin/sha256_profile
sratools: /usr/local/bin/sratools
uuid: /usr/local/bin/uuid
uuid-config: /usr/local/bin/uuid-config