container.yaml

url: https://biocontainers.pro/tools/kneaddata
maintainer: '@vsoch'
description: shpc-registry automated BioContainers addition for kneaddata
latest:
  0.12.0--pyhdfd78af_1: sha256:e887a204da73e4c8362e7abe4998b516867609213e14d71b0ef05bb01427f55f
tags:
  0.9.0--pyhdfd78af_0: sha256:82470860691070b1a8934fa77a0b149c74e10b2c4d41f2ea534f36e9cce00a25
  0.12.0--pyhdfd78af_0: sha256:bd990e3d0f22d21a3322c3808a866d4a52b8b8d04129dfb7b1e3cd087a5ed732
  0.10.0--pyhdfd78af_0: sha256:9ee7eb1d0ac4809beaadde622a0299677575708fa6cb45e9f1ad55388860aea4
  0.12.0--pyhdfd78af_1: sha256:e887a204da73e4c8362e7abe4998b516867609213e14d71b0ef05bb01427f55f
docker: quay.io/biocontainers/kneaddata
aliases:
  kneaddata: /usr/local/bin/kneaddata
  kneaddata_bowtie2_discordant_pairs: /usr/local/bin/kneaddata_bowtie2_discordant_pairs
  kneaddata_build_database: /usr/local/bin/kneaddata_build_database
  kneaddata_database: /usr/local/bin/kneaddata_database
  kneaddata_read_count_table: /usr/local/bin/kneaddata_read_count_table
  kneaddata_test: /usr/local/bin/kneaddata_test
  kneaddata_trf_parallel: /usr/local/bin/kneaddata_trf_parallel
  trf4.10.0-rc.2.linux64.exe: /usr/local/bin/trf4.10.0-rc.2.linux64.exe
  trf: /usr/local/bin/trf
  fastqc: /usr/local/bin/fastqc
  trimmomatic: /usr/local/bin/trimmomatic
  bowtie2: /usr/local/bin/bowtie2
  bowtie2-align-l: /usr/local/bin/bowtie2-align-l
  bowtie2-align-s: /usr/local/bin/bowtie2-align-s
  bowtie2-build: /usr/local/bin/bowtie2-build
  bowtie2-build-l: /usr/local/bin/bowtie2-build-l
  bowtie2-build-s: /usr/local/bin/bowtie2-build-s