/
container.yaml
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/
container.yaml
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url: https://biocontainers.pro/tools/openms-tools
maintainer: '@vsoch'
description: shpc-registry automated BioContainers addition for openms-tools
latest:
2.4.0--hc9558a2_3: sha256:6ee198784c494405ed4d3aba7b1a32719c8d304f835269905eba5d65001176d1
tags:
2.4.0--hc9558a2_3: sha256:6ee198784c494405ed4d3aba7b1a32719c8d304f835269905eba5d65001176d1
docker: quay.io/biocontainers/openms-tools
aliases:
AccurateMassSearch: /usr/local/bin/AccurateMassSearch
AssayGeneratorMetabo: /usr/local/bin/AssayGeneratorMetabo
BaselineFilter: /usr/local/bin/BaselineFilter
CVInspector: /usr/local/bin/CVInspector
ClusterMassTraces: /usr/local/bin/ClusterMassTraces
ClusterMassTracesByPrecursor: /usr/local/bin/ClusterMassTracesByPrecursor
CometAdapter: /usr/local/bin/CometAdapter
CompNovo: /usr/local/bin/CompNovo
CompNovoCID: /usr/local/bin/CompNovoCID
ConsensusID: /usr/local/bin/ConsensusID
ConsensusMapNormalizer: /usr/local/bin/ConsensusMapNormalizer
CruxAdapter: /usr/local/bin/CruxAdapter
DTAExtractor: /usr/local/bin/DTAExtractor
DatabaseFilter: /usr/local/bin/DatabaseFilter
DeMeanderize: /usr/local/bin/DeMeanderize
Decharger: /usr/local/bin/Decharger
DecoyDatabase: /usr/local/bin/DecoyDatabase
Digestor: /usr/local/bin/Digestor
DigestorMotif: /usr/local/bin/DigestorMotif
EICExtractor: /usr/local/bin/EICExtractor
ERPairFinder: /usr/local/bin/ERPairFinder
ExternalCalibration: /usr/local/bin/ExternalCalibration
FFEval: /usr/local/bin/FFEval
FalseDiscoveryRate: /usr/local/bin/FalseDiscoveryRate
FeatureFinderCentroided: /usr/local/bin/FeatureFinderCentroided
FeatureFinderIdentification: /usr/local/bin/FeatureFinderIdentification
FeatureFinderIsotopeWavelet: /usr/local/bin/FeatureFinderIsotopeWavelet
FeatureFinderMRM: /usr/local/bin/FeatureFinderMRM
FeatureFinderMetabo: /usr/local/bin/FeatureFinderMetabo
FeatureFinderMultiplex: /usr/local/bin/FeatureFinderMultiplex
FeatureFinderSuperHirn: /usr/local/bin/FeatureFinderSuperHirn
FeatureLinkerLabeled: /usr/local/bin/FeatureLinkerLabeled
FeatureLinkerUnlabeled: /usr/local/bin/FeatureLinkerUnlabeled
FeatureLinkerUnlabeledKD: /usr/local/bin/FeatureLinkerUnlabeledKD
FeatureLinkerUnlabeledQT: /usr/local/bin/FeatureLinkerUnlabeledQT
FidoAdapter: /usr/local/bin/FidoAdapter
FileConverter: /usr/local/bin/FileConverter
FileFilter: /usr/local/bin/FileFilter
FileInfo: /usr/local/bin/FileInfo
FileMerger: /usr/local/bin/FileMerger
FuzzyDiff: /usr/local/bin/FuzzyDiff
GenericWrapper: /usr/local/bin/GenericWrapper
HighResPrecursorMassCorrector: /usr/local/bin/HighResPrecursorMassCorrector
IDConflictResolver: /usr/local/bin/IDConflictResolver
IDDecoyProbability: /usr/local/bin/IDDecoyProbability
IDExtractor: /usr/local/bin/IDExtractor
IDFileConverter: /usr/local/bin/IDFileConverter
IDFilter: /usr/local/bin/IDFilter
IDMapper: /usr/local/bin/IDMapper
IDMassAccuracy: /usr/local/bin/IDMassAccuracy
IDMerger: /usr/local/bin/IDMerger
IDPosteriorErrorProbability: /usr/local/bin/IDPosteriorErrorProbability
IDRTCalibration: /usr/local/bin/IDRTCalibration
IDRipper: /usr/local/bin/IDRipper
IDScoreSwitcher: /usr/local/bin/IDScoreSwitcher
IDSplitter: /usr/local/bin/IDSplitter
InclusionExclusionListCreator: /usr/local/bin/InclusionExclusionListCreator
InspectAdapter: /usr/local/bin/InspectAdapter
InternalCalibration: /usr/local/bin/InternalCalibration
IsobaricAnalyzer: /usr/local/bin/IsobaricAnalyzer
LabeledEval: /usr/local/bin/LabeledEval
LowMemPeakPickerHiRes: /usr/local/bin/LowMemPeakPickerHiRes
LowMemPeakPickerHiResRandomAccess: /usr/local/bin/LowMemPeakPickerHiResRandomAccess
LuciphorAdapter: /usr/local/bin/LuciphorAdapter
MRMMapper: /usr/local/bin/MRMMapper
MRMPairFinder: /usr/local/bin/MRMPairFinder
MRMTransitionGroupPicker: /usr/local/bin/MRMTransitionGroupPicker
MSFraggerAdapter: /usr/local/bin/MSFraggerAdapter
MSGFPlusAdapter: /usr/local/bin/MSGFPlusAdapter
MSSimulator: /usr/local/bin/MSSimulator
MSstatsConverter: /usr/local/bin/MSstatsConverter
MaRaClusterAdapter: /usr/local/bin/MaRaClusterAdapter
MapAlignerIdentification: /usr/local/bin/MapAlignerIdentification
MapAlignerPoseClustering: /usr/local/bin/MapAlignerPoseClustering
MapAlignerSpectrum: /usr/local/bin/MapAlignerSpectrum
MapNormalizer: /usr/local/bin/MapNormalizer
MapRTTransformer: /usr/local/bin/MapRTTransformer
MapStatistics: /usr/local/bin/MapStatistics
MascotAdapter: /usr/local/bin/MascotAdapter
MascotAdapterOnline: /usr/local/bin/MascotAdapterOnline
MassCalculator: /usr/local/bin/MassCalculator
MassTraceExtractor: /usr/local/bin/MassTraceExtractor
MetaProSIP: /usr/local/bin/MetaProSIP
MetaboliteAdductDecharger: /usr/local/bin/MetaboliteAdductDecharger
MetaboliteSpectralMatcher: /usr/local/bin/MetaboliteSpectralMatcher
MultiplexResolver: /usr/local/bin/MultiplexResolver
MyriMatchAdapter: /usr/local/bin/MyriMatchAdapter
MzMLSplitter: /usr/local/bin/MzMLSplitter
MzTabExporter: /usr/local/bin/MzTabExporter
NoiseFilterGaussian: /usr/local/bin/NoiseFilterGaussian
NoiseFilterSGolay: /usr/local/bin/NoiseFilterSGolay
NovorAdapter: /usr/local/bin/NovorAdapter
OMSSAAdapter: /usr/local/bin/OMSSAAdapter
OpenMSInfo: /usr/local/bin/OpenMSInfo
OpenPepXL: /usr/local/bin/OpenPepXL
OpenPepXLLF: /usr/local/bin/OpenPepXLLF
OpenSwathAnalyzer: /usr/local/bin/OpenSwathAnalyzer
OpenSwathAssayGenerator: /usr/local/bin/OpenSwathAssayGenerator
OpenSwathChromatogramExtractor: /usr/local/bin/OpenSwathChromatogramExtractor
OpenSwathConfidenceScoring: /usr/local/bin/OpenSwathConfidenceScoring
OpenSwathDIAPreScoring: /usr/local/bin/OpenSwathDIAPreScoring
OpenSwathDecoyGenerator: /usr/local/bin/OpenSwathDecoyGenerator
OpenSwathFeatureXMLToTSV: /usr/local/bin/OpenSwathFeatureXMLToTSV
OpenSwathFileSplitter: /usr/local/bin/OpenSwathFileSplitter
OpenSwathMzMLFileCacher: /usr/local/bin/OpenSwathMzMLFileCacher
OpenSwathRTNormalizer: /usr/local/bin/OpenSwathRTNormalizer
OpenSwathRewriteToFeatureXML: /usr/local/bin/OpenSwathRewriteToFeatureXML
OpenSwathWorkflow: /usr/local/bin/OpenSwathWorkflow
PSMFeatureExtractor: /usr/local/bin/PSMFeatureExtractor
PTModel: /usr/local/bin/PTModel
PTPredict: /usr/local/bin/PTPredict
PeakPickerHiRes: /usr/local/bin/PeakPickerHiRes
PeakPickerIterative: /usr/local/bin/PeakPickerIterative
PeakPickerWavelet: /usr/local/bin/PeakPickerWavelet
PepNovoAdapter: /usr/local/bin/PepNovoAdapter
PeptideIndexer: /usr/local/bin/PeptideIndexer
PercolatorAdapter: /usr/local/bin/PercolatorAdapter
PhosphoScoring: /usr/local/bin/PhosphoScoring
PrecursorIonSelector: /usr/local/bin/PrecursorIonSelector
PrecursorMassCorrector: /usr/local/bin/PrecursorMassCorrector
ProteinInference: /usr/local/bin/ProteinInference
ProteinQuantifier: /usr/local/bin/ProteinQuantifier
ProteinResolver: /usr/local/bin/ProteinResolver
QCCalculator: /usr/local/bin/QCCalculator
QCEmbedder: /usr/local/bin/QCEmbedder
QCExporter: /usr/local/bin/QCExporter
QCExtractor: /usr/local/bin/QCExtractor
QCImporter: /usr/local/bin/QCImporter
QCMerger: /usr/local/bin/QCMerger
QCShrinker: /usr/local/bin/QCShrinker
RNADigestor: /usr/local/bin/RNADigestor
RNPxlSearch: /usr/local/bin/RNPxlSearch
RNPxlXICFilter: /usr/local/bin/RNPxlXICFilter
RTEvaluation: /usr/local/bin/RTEvaluation
RTModel: /usr/local/bin/RTModel
RTPredict: /usr/local/bin/RTPredict
SeedListGenerator: /usr/local/bin/SeedListGenerator
SemanticValidator: /usr/local/bin/SemanticValidator
SequenceCoverageCalculator: /usr/local/bin/SequenceCoverageCalculator
SimpleSearchEngine: /usr/local/bin/SimpleSearchEngine
SiriusAdapter: /usr/local/bin/SiriusAdapter
SpecLibCreator: /usr/local/bin/SpecLibCreator
SpecLibSearcher: /usr/local/bin/SpecLibSearcher
SpectraFilterBernNorm: /usr/local/bin/SpectraFilterBernNorm
SpectraFilterMarkerMower: /usr/local/bin/SpectraFilterMarkerMower
SpectraFilterNLargest: /usr/local/bin/SpectraFilterNLargest
SpectraFilterNormalizer: /usr/local/bin/SpectraFilterNormalizer
SpectraFilterParentPeakMower: /usr/local/bin/SpectraFilterParentPeakMower
SpectraFilterScaler: /usr/local/bin/SpectraFilterScaler
SpectraFilterSqrtMower: /usr/local/bin/SpectraFilterSqrtMower
SpectraFilterThresholdMower: /usr/local/bin/SpectraFilterThresholdMower
SpectraFilterWindowMower: /usr/local/bin/SpectraFilterWindowMower
SpectraMerger: /usr/local/bin/SpectraMerger
SpectraSTSearchAdapter: /usr/local/bin/SpectraSTSearchAdapter
SvmTheoreticalSpectrumGeneratorTrainer: /usr/local/bin/SvmTheoreticalSpectrumGeneratorTrainer
TICCalculator: /usr/local/bin/TICCalculator
TOFCalibration: /usr/local/bin/TOFCalibration
TargetedFileConverter: /usr/local/bin/TargetedFileConverter
TextExporter: /usr/local/bin/TextExporter
TransformationEvaluation: /usr/local/bin/TransformationEvaluation
XFDR: /usr/local/bin/XFDR
XMLValidator: /usr/local/bin/XMLValidator
XTandemAdapter: /usr/local/bin/XTandemAdapter
svm-predict: /usr/local/bin/svm-predict
svm-scale: /usr/local/bin/svm-scale
svm-train: /usr/local/bin/svm-train
CreateDOMDocument: /usr/local/bin/CreateDOMDocument
DOMCount: /usr/local/bin/DOMCount
DOMPrint: /usr/local/bin/DOMPrint
EnumVal: /usr/local/bin/EnumVal
MemParse: /usr/local/bin/MemParse
PParse: /usr/local/bin/PParse
PSVIWriter: /usr/local/bin/PSVIWriter