/
container.yaml
75 lines (75 loc) · 3.3 KB
/
container.yaml
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
url: https://biocontainers.pro/tools/segway
maintainer: '@vsoch'
description: shpc-registry automated BioContainers addition for segway
latest:
3.0.4--pyh7cba7a3_1: sha256:dde5e98f11262551490fc75c77b54030b8727fa64e5d331c8664a3e634577513
tags:
3.0.4--pyh5e36f6f_0: sha256:6632154b8ead17cb519199e38f548b1c68826bf25f4738f7c27f1cad976fb8f2
3.0.4--pyh7cba7a3_1: sha256:dde5e98f11262551490fc75c77b54030b8727fa64e5d331c8664a3e634577513
docker: quay.io/biocontainers/segway
aliases:
bigWigToBedGraph: /usr/local/bin/bigWigToBedGraph
discrete-mi: /usr/local/bin/discrete-mi
filter: /usr/local/bin/filter
fixTri.sh: /usr/local/bin/fixTri.sh
generate_random_graph.pl: /usr/local/bin/generate_random_graph.pl
genomedata-close-data: /usr/local/bin/genomedata-close-data
genomedata-erase-data: /usr/local/bin/genomedata-erase-data
genomedata-hardmask: /usr/local/bin/genomedata-hardmask
genomedata-histogram: /usr/local/bin/genomedata-histogram
genomedata-info: /usr/local/bin/genomedata-info
genomedata-load: /usr/local/bin/genomedata-load
genomedata-load-assembly: /usr/local/bin/genomedata-load-assembly
genomedata-load-data: /usr/local/bin/genomedata-load-data
genomedata-load-seq: /usr/local/bin/genomedata-load-seq
genomedata-open-data: /usr/local/bin/genomedata-open-data
genomedata-query: /usr/local/bin/genomedata-query
genomedata-report: /usr/local/bin/genomedata-report
gmtkDMLPtrain: /usr/local/bin/gmtkDMLPtrain
gmtkDTindex: /usr/local/bin/gmtkDTindex
gmtkEMtrain: /usr/local/bin/gmtkEMtrain
gmtkJT: /usr/local/bin/gmtkJT
gmtkKernel: /usr/local/bin/gmtkKernel
gmtkMMItrain: /usr/local/bin/gmtkMMItrain
gmtkModelInfo: /usr/local/bin/gmtkModelInfo
gmtkNGramIndex: /usr/local/bin/gmtkNGramIndex
gmtkOnline: /usr/local/bin/gmtkOnline
gmtkParmConvert: /usr/local/bin/gmtkParmConvert
gmtkPrint: /usr/local/bin/gmtkPrint
gmtkTFmerge: /usr/local/bin/gmtkTFmerge
gmtkTie: /usr/local/bin/gmtkTie
gmtkTime: /usr/local/bin/gmtkTime
gmtkTriangulate: /usr/local/bin/gmtkTriangulate
gmtkViterbi: /usr/local/bin/gmtkViterbi
hidehead: /usr/local/bin/hidehead
innerjoin: /usr/local/bin/innerjoin
intersect: /usr/local/bin/intersect
mean: /usr/local/bin/mean
nohead: /usr/local/bin/nohead
obs-cat: /usr/local/bin/obs-cat
obs-concat: /usr/local/bin/obs-concat
obs-diff: /usr/local/bin/obs-diff
obs-info: /usr/local/bin/obs-info
obs-print: /usr/local/bin/obs-print
obs-skmeans: /usr/local/bin/obs-skmeans
obs-stats: /usr/local/bin/obs-stats
obs-window: /usr/local/bin/obs-window
run_genomedata_tests.py: /usr/local/bin/run_genomedata_tests.py
segway: /usr/local/bin/segway
segway-layer: /usr/local/bin/segway-layer
segway-task: /usr/local/bin/segway-task
segway-winner: /usr/local/bin/segway-winner
test_genomedata.py: /usr/local/bin/test_genomedata.py
triangulateGA: /usr/local/bin/triangulateGA
triangulateParallel: /usr/local/bin/triangulateParallel
triangulateTimings: /usr/local/bin/triangulateTimings
bedToBigBed: /usr/local/bin/bedToBigBed
pt2to3: /usr/local/bin/pt2to3
ptdump: /usr/local/bin/ptdump
ptrepack: /usr/local/bin/ptrepack
pttree: /usr/local/bin/pttree
my_print_defaults: /usr/local/bin/my_print_defaults
mysql_config: /usr/local/bin/mysql_config
perror: /usr/local/bin/perror
shiftBed: /usr/local/bin/shiftBed
annotateBed: /usr/local/bin/annotateBed