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default <= weight -> set to 0 #30

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snaketron opened this issue Jun 19, 2024 · 0 comments

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snaketron commented Jun 19, 2024 •

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There are currently 4 weight values at each edge. weight, nweight, cweight, ncweight

The default edge weight = weight, BLOSUM62 score of pairwise alignment between complete CDR3s of node i and j,

In the clustering step (coming next), we should ensure the user specifies what should be considered as weight -> do clustering.

As one of the first substeps we should remove E(g)$weight <=0, however weight is defined

snaketron self-assigned this

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