This is the SolveBio Python package and command-line interface (CLI). This module has been tested on Python 2.6+, Python 3.1+ and PyPy.
This version of the Python Client is compatible with Vault-based datasets only (released on July 28th, 2017).
Developer documentation is available at docs.solvebio.com. For more information about SolveBio visit www.solvebio.com.
Install solvebio using pip:
pip install solvebio
For interactive use, we recommend installing IPython and gnureadline:
pip install ipython
pip install gnureadline
To log in, type:
solvebio login
Enter your SolveBio credentials and you should be good to go!
NOTE: The following installer works for Python 2.x only.
Open your terminal and paste the following command:
curl -skL install.solvebio.com/python | bash
pip install -e git+https://github.com/solvebio/solvebio-python.git#egg=solve
git clone https://github.com/solvebio/solvebio-python.git
cd solve-python/
python setup.py develop
To run tests use nosetest:
nosetests solvebio.test.test_dataset
Or install tox and run:
pip install tox
tox
Maintainers can release solvebio-python to PyPI with the following steps:
# Bump the version and update the changelog
bumpversion <major|minor|patch>
git push --tags
github_changelog_generator
# Build and release to PyPI
find . -name '*.pyc' -delete
rm -rf dist/*
python setup.py clean
python setup.py sdist bdist_wheel
twine upload dist/*
You will need to configure Twine in order to push to PyPI.
Developer documentation is available at docs.solvebio.com.
If you experience problems with this package, please create a GitHub Issue.
For all other requests, please email SolveBio Support.