sbt_combine.py

"""combine multiple Sequence Bloom Trees"""

def subparser(subparsers):
    subparser = subparsers.add_parser('sbt_combine')
    subparser.add_argument('sbt_name', help='name to save SBT into')
    subparser.add_argument(
        'sbts', nargs='+',
        help='SBTs to combine to form a new SBT'
    )
    subparser.add_argument(
        '-x', '--bf-size', metavar='S', type=float, default=1e5
    )

    subparser = subparsers.add_parser('sbt_combine')
    subparser.add_argument('sbt_name', help='name to save SBT into')
    subparser.add_argument(
        'sbts', nargs='+',
        help='SBTs to combine to form a new SBT'
    )
    subparser.add_argument(
        '-x', '--bf-size', metavar='S', type=float, default=1e5
    )


def main(args):
    import sourmash
    return sourmash.commands.sbt_combine(args)