prot.sqlmf
is a SQL version of the manifest in tests/test-data/prot/all.zip
.
delmont-6.csv
is a fixed-up version of tests/test-data/lca/delmont-6.csv
that works with sourmash tax
.
lca.sqldb
is an LCA_SqliteDatabase
created with TARA_ASE_MAG_00031
and TARA_PSW_MAG_00136
, using the lineage in delmont-6.csv
.
test.taxonomy.db
is a SqliteLineage v1.0 lineage db created with sourmash tax prepare
from tests/test-data/tax/test.taxonomy.db
.
index.sqldb
is a k=31 sqldb created from tests/test-data/{47,63}.fa.sig
.
shewanella-lineage.csv
is a hand-hacked file containing lineages for 47 and 63.
lca2.sqldb
is an LCA_SqliteDatabase
created from tests/test-data/{47,63}.fa.sig
and shewanella-lineage.csv
.