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inflate.py
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inflate.py
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"""borrow abundances from one signature => one or more other signatures"""
from sourmash.cli.utils import (add_moltype_args, add_ksize_arg,
add_picklist_args)
def subparser(subparsers):
subparser = subparsers.add_parser('inflate')
subparser.add_argument('signature_from')
subparser.add_argument('other_sigs', nargs='+')
subparser.add_argument(
'-q', '--quiet', action='store_true',
help='suppress non-error output'
)
subparser.add_argument(
'-o', '--output', metavar='FILE', default='-',
help='output signature to this file (default stdout)'
)
subparser.add_argument(
'-f', '--force', action='store_true',
help='try to load all files as signatures'
)
add_ksize_arg(subparser)
add_moltype_args(subparser)
add_picklist_args(subparser)
def main(args):
import sourmash
return sourmash.sig.__main__.inflate(args)