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Compute GM/WM contrast on the T2* data to interpret GM CSA values #230

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jcohenadad opened this issue Oct 1, 2020 · 0 comments
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@jcohenadad
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Based on a suggestion from @renelabounek, the idea would be to compute WM/GM mean signal to understand the origin of the vendor-specific differences in GM CSA, especially from Philips (which shows low values).

To do so, the steps involved are:

  • add WM seg (SC minus GM seg)
  • extract signal in WM and GM
  • output in csv file
  • release spine-generic
  • re-run processing in data-multi-subject
  • compute stats + figs
  • create release for data-multi-subject
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