AWRI Fisheries Abundance Software Initial

Simulation for mark and recapture method used in ecology to estimate population size.

Current Functionality

• Choose sampling size.
• Add small variations in sampling size to simulate real sampling.
• Choose the number of samplings.

To-do:

• Fit the needs of research
• Find a way to use ndarray to enhance the speed.
• Improve population def and marking.
• Add tools to visualize the effect of variation of different parameters.
• Develop GUI or a web-based UI.

How to use?

1. Online method:

   1. Click here to launch master branch on Binder. (Note: it may take some time for the branch to load, so be patient.)
   2. Click on MnR.ipynb to launch the notebook.

2. Standalone GUI tool:

   1. Download MnRGUI.py
   2. Go to the the directory where you downloaded the file.
   3. Run MnRGUI.py with python3 (For linux users: run python3 MnRGUI.py)

3. Offline notebook:
   Download the MnR.ipynb file and open it with Jupyter Notebook.