Inconsistency of output files

[gamzemdn]

Hi Dear Kosugi,

When I analyse output files I see that caller.TF file has true positive INS type variants but caller.eval file shows lines in below:
INS

2 3 4 5 6 7 8 9 10 12
Call (A) 43390 12809 3529 1385 779 579 500 458 425 348
Recall (A) 3 2.6 2.4 2.2 2.1 1.9 1.7 1.6 1.5 1.2
Precis (A) 0.9 2.8 9.4 22.5 37.4 45.7 48.4 48.6 48.9 47.9

convert:

'/home/gamze/Downloads/EvalSVcallers-master/scripts/convert_SV_callers_vcf.pl' -t BreakDancer '/home/breakdancer.vcf' >breakdancer.vcf

overlap:

'/home/gamze/Downloads/EvalSVcallers-master/scripts/evaluate_SV_callers.pl' -r N '/home/gamze/Downloads/EvalSVcallers-master/breakdancer.vcf' -of 3 >breakdancer_overlap.vcf

Why I only see A here not SS, S, M , L like in the other types? For example how can I interpret Recall(A) in terms of size?
Best Regards,

[stat-lab]

Most SV calling tools with short read cannot accurately detect INS sizes, especially those larger than read length. So, our script for INS evaluation does not evaluate precision and recall according to the size of the INS, but only determine them for INS breakpoints.