the clang compiler does not support -pg option on versions of OS X 10.9 and later

[TommySchooner]

Hi there,

I was trying to install bamUtil.

However, it shows the following error:

clang: error: the clang compiler does not support -pg option on versions of OS X 10.9 and later
make[1]: *** [../bin/profile/bam] Error 1
make: *** [src] Error 2

I wonder what should I do?

Thank you!

[jonathonl]

Presumably, you don't need a profile build. Run make instead of make all.

[TommySchooner]

Sorry, sorry for not making it clear.

I ran "make" and it went okay. Then I ran make install INSTALLDIR=/Users/apple/bamUtil-master

But the above error appeared.

Sorry I am a newbie to bioinformatics and coding and may need some guidances..

Thank you!

[jonathonl]

I see... I'm guessing the 'install' target is dependent on the 'all' target. You should be able to get away with simply running make && cp bin/bam /Users/apple/bamUtil-master/bin/.

[TommySchooner]

Thank you very much for helping! It is working now without any problem! Thank you!