You signed in with another tab or window. Reload to refresh your session.You signed out in another tab or window. Reload to refresh your session.You switched accounts on another tab or window. Reload to refresh your session.Dismiss alert
1. Compile Parse_v2.f using a fortran compiler. The program was tested using GNU Fortran (Homebrew GCC 11.3.0_2) 11.3.0.
2. Run the program by using the executable followed by the protein primary sequence, for example "./a.out SEQUENCESEQUENCESEQUENCESEQUENCE" without the quotes.
The primary sequence length must be at least 25 residues, and no longer than 10000. Also, the sequence should have no gaps and is restricted to the 20 common amino acid types.
Program output:
Converted sequence
Summed classifier distance of P-labeled windows
Summed classifier distance of P-labeled windows with Uπ and Uq extension