protocol.py.jinja

################################################################################################
# This example protocol will create a new destination container and
# transfer `volume` amount of `source_aliquot` into each well.
#
# Test locally with some like the following, though will need to supply a valid project id.
# You must be in the same directory as the manifest and the protocol for the command to succeed.
#
#   transcriptic launch --local {{ name }} -p SOME_PROJECT_ID
#
# For more information about autoprotocol-python check out the documentation.
#
#   http://autoprotocol-python.readthedocs.io/en/latest/
#
# For more information about editing the manifest.json check out the documentation.
#
#   https://developers.transcriptic.com/v1.0/docs/input-types
################################################################################################


def {{ name }}(protocol, params):
    # These arguments and their types are specified in the manifest.json
    #   source_aliquot is of type Well
    #   volume is of type string and will be in the format similar to '100:microliter'
    #   dest_ctype is of type string and will be one of the options specified in the manifest.
    source_well = params["source_aliquot"]
    volume      = params["volume"]
    dest_ctype  = params["dest_ctype"]

    # Create a ref for a the destination container
    dest_container = protocol.ref("destination_container",
                                  cont_type=dest_ctype,
                                  storage="ambient")

    for dest_well in dest_container.wells_from(0, 12):
        # add an instruction to the protocol
        protocol.transfer(source_well, dest_well, volume)


if __name__ == '__main__':
    from autoprotocol.harness import run
    run({{ name }}, "{{ name }}")