Raw data and scripts associated with "Structural biases in disordered proteins are prevalent in the cell"
by David Moses, Karina Guadalupe, Feng Yu, Eduardo Flores, Anthony Perez, Ralph McAnelly, Nora M. Shamoon, Gagandeep Kaur, Estefania Cuevas-Zepeda, Andrea D. Merg, Erik W. Martin, Alex S. Holehouse, and Shahar Sukenik
Version 2 of this manuscript, available here: https://www.biorxiv.org/content/10.1101/2021.11.24.469609v2
To generate a figure, clone the repository and run the script from within the directory on your computer.
Scripts to generate data were tested on python 3.9. Libraries used in the scripts are pandas, numpy, matplotlib, and statannot.
Directory structure as follows:
./Fig_2 - Tables and scripts used to generate all panels in Figure 2
./Fig_3 - Tables and scripts used to generate all panels in Figure 3
./Fig_4 - Tables and scripts used to generate all panels in Figure 4
./Fig_5 - Tables and scripts used to generate Figs. 5B-D
./FIJI - sample images with the scripts used to generate the live cell data. FIJI script has comments at the very top for set measurements, make sure to set them so that python scripts work correctly.
Older Github repositories corresponding to previous versions of the manuscript
./biorxiv_v1 - all data for version 1 of the manuscript
./biorxiv_v2 - Older repository for version 2 of manuscript. Any new data and figures added to the first version of this manuscript.