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cli: HostRunner actions failing when run in parallel and in a non-git directory #678
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ivotron
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May 24, 2020
fixes #697 - adds a --runtime flag that allows to provide 'singularity' or 'docker' (default). When singularity is given, the workflow is executed in singularity containers. fixes #670 - correctly configures the bindings for HOME and Github Workflow environment variables fixes #678 - changes the implementation of '--parallel' so that it uses a process pool instead of a thread one.
ivotron
pushed a commit
that referenced
this issue
May 25, 2020
fixes #697 - adds a --runtime flag that allows to provide 'singularity' or 'docker' (default). When singularity is given, the workflow is executed in singularity containers. fixes #670 - correctly configures the bindings for HOME and Github Workflow environment variables fixes #678 - changes the implementation of '--parallel' so that it uses a process pool instead of a thread one.
ivotron
pushed a commit
that referenced
this issue
May 25, 2020
fixes #697 - adds a --runtime flag that allows to provide 'singularity' or 'docker' (default). When singularity is given, the workflow is executed in singularity containers. fixes #670 - correctly configures the bindings for HOME and Github Workflow environment variables fixes #678 - changes the implementation of '--parallel' so that it uses a process pool instead of a thread one.
ivotron
pushed a commit
that referenced
this issue
May 25, 2020
fixes #697 - adds a --runtime flag that allows to provide 'singularity' or 'docker' (default). When singularity is given, the workflow is executed in singularity containers. fixes #670 - correctly configures the bindings for HOME and Github Workflow environment variables fixes #678 - changes the implementation of '--parallel' so that it uses a process pool instead of a thread one.
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