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feature_transformed.py
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feature_transformed.py
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# Copyright 2018 The TensorFlow Probability Authors.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
# ============================================================================
"""FeatureTransformed kernel."""
import tensorflow.compat.v2 as tf
from tensorflow_probability.python.math.psd_kernels import positive_semidefinite_kernel as psd_kernel
__all__ = ['FeatureTransformed']
class FeatureTransformed(psd_kernel.AutoCompositeTensorPsdKernel):
"""Input transformed kernel.
Given a kernel `k` and function `f`, compute `k_{new}(x, y) = k(f(x), f(y))`.
### Examples
```python
import tensorflow as tf
import tensorflow_probability as tfp
from tensorflow_probability.positive_semidefinite_kernel.internal import util
tfpk = tfp.math.psd_kernels
base_kernel = tfpk.ExponentiatedQuadratic(amplitude=2., length_scale=1.)
```
- Identity function.
```python
# This is the same as base_kernel
same_kernel = tfpk.FeatureTransformed(
base_kernel,
transformation_fn=lambda x, _, _: x)
```
- Exponential transformation.
```python
exp_kernel = tfpk.FeatureTransformed(
base_kernel,
transformation_fn=lambda x, _, _: tf.exp(x))
```
- Transformation with broadcasting parameters.
```python
# Exponentiate inputs
p = np.random.uniform(low=2., high=3., size=[10, 2])
def inputs_to_power(x, feature_ndims, param_expansion_ndims):
# Make sure we account for extra feature dimensions for
# broadcasting purposes.
power = util.pad_shape_with_ones(
p,
ndims=feature_ndims + param_expansion_ndims,
start=-(feature_ndims + 1))
return x ** power
power_kernel = tfpk.FeatureTransformed(
base_kernel, transformation_fn=inputs_to_power)
"""
def __init__(
self,
kernel,
transformation_fn,
validate_args=False,
parameters=None,
name='FeatureTransformed'):
"""Construct an FeatureTransformed kernel instance.
Args:
kernel: `PositiveSemidefiniteKernel` instance. Inputs are transformed and
passed in to this kernel. Parameters to `kernel` must be broadcastable
with parameters of `transformation_fn`.
transformation_fn: Callable. `transformation_fn` takes in an input
`Tensor`, a Python integer representing the number of feature
dimensions, and a Python integer representing the
`param_expansion_ndims` arg of `_apply`. Computations in
`transformation_fn` must be broadcastable with parameters of `kernel`.
validate_args: If `True`, parameters are checked for validity despite
possibly degrading runtime performance
parameters: When subclassing, a dict of constructor arguments.
name: Python `str` name prefixed to Ops created by this class.
"""
parameters = dict(locals()) if parameters is None else parameters
with tf.name_scope(name):
self._kernel = kernel
self._transformation_fn = transformation_fn
super(FeatureTransformed, self).__init__(
feature_ndims=kernel.feature_ndims,
dtype=kernel.dtype,
name=name,
validate_args=validate_args,
parameters=parameters)
def _apply(self, x1, x2, example_ndims=0):
return self._kernel.apply(
self._transformation_fn(
x1, self.feature_ndims, example_ndims),
self._transformation_fn(
x2, self.feature_ndims, example_ndims),
example_ndims)
def _matrix(self, x1, x2):
return self._kernel.matrix(
self._transformation_fn(x1, self.feature_ndims, 1),
self._transformation_fn(x2, self.feature_ndims, 1))
def _tensor(self, x1, x2, x1_example_ndims, x2_example_ndims):
return self._kernel.tensor(
self._transformation_fn(
x1, self.feature_ndims, x1_example_ndims),
self._transformation_fn(
x2, self.feature_ndims, x2_example_ndims),
x1_example_ndims, x2_example_ndims)
@property
def kernel(self):
"""Base kernel to pass transformed inputs."""
return self._kernel
@property
def transformation_fn(self):
"""Function that preprocesses inputs before handing them to `kernel`."""
return self._transformation_fn