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app-library-report.json
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app-library-report.json
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{
"failed_documents": [
{
"name": "DRC_app",
"version": "0.1.0",
"url": "https://github.com/tercen/DRC_app",
"error": "ServiceError({statusCode: -142, error: task.test.operator.bad.value, reason: At column ds0.Ymax -- val != refVal -- at line 0 -- val = 2.3976375312700577 refVal = 2.397637611604864})"
},
{
"name": "ETS_app",
"version": "0.0.2",
"url": "https://github.com/tercen/ETS_app",
"error": "ServiceError({statusCode: -142, error: task.test.operator.bad.nRelations, reason: simpleRelations.length != outputSchemas.length})"
},
{
"name": "MTvC_app",
"version": "0.1.0",
"url": "https://github.com/tercen/MTvC_app",
"error": "ServiceError({statusCode: -142, error: task.test.operator.bad.column.type, reason: .sids -- bad type expected double found int32})"
},
{
"name": "PTK QC_app",
"version": "0.0.2",
"url": "https://github.com/tercen/QC_PTK_app",
"error": "ServiceError({statusCode: -142, error: task.test.operator.bad.value, reason: At column ds0.intercept -- val != refVal -- at line 16 -- val = 0.11306818281300333 refVal = 0.11306818281300388})"
},
{
"name": "QC_STK_app",
"version": "0.1.0",
"url": "https://github.com/tercen/QC_STK_app",
"error": "ServiceError({statusCode: -142, error: operator.run.test.not.found, reason: TEST -- test not found.})"
},
{
"name": "UKA_PTK_app",
"version": "0.1.0",
"url": "https://github.com/tercen/UKA_app",
"error": "ServiceError({statusCode: 404, error: release.not.found, reason: Release for tagName 0.0.3 not found in https://github.com/tercen/upstream_kinase_analysis_shiny_operator})"
},
{
"name": "Fold Change_app",
"version": "0.1.0",
"url": "https://github.com/tercen/foldchange_app",
"error": "ServiceError({statusCode: -142, error: task.test.operator.bad.value, reason: At column ds0.minus -- val != refVal -- at line 0 -- val = NaN refVal = -0.62446801830083})"
},
{
"name": "Log Fold Change_app",
"version": "0.1.0",
"url": "https://github.com/tercen/logfoldchange_app",
"error": "ServiceError({statusCode: -142, error: task.test.operator.bad.value, reason: At column ds0.minus -- val != refVal -- at line 0 -- val = NaN refVal = -0.62446801830083})"
}
],
"notest_documents": [],
"success_documents": [
{
"kind": "Workflow",
"id": "019974b78a65232d86360e3f1e50bfef",
"isDeleted": false,
"rev": "3-bb3661497dca8535e025ab0d7dfeedfe",
"description": "Export file for PTK CV calculations in automated report",
"name": "PTK_CV_Export_app",
"createdBy": "plinders",
"acl": {
"kind": "Acl",
"owner": "pamgene",
"aces": []
},
"createdDate": {
"kind": "Date",
"value": "2022-04-25T13:15:53.000Z"
},
"lastModifiedDate": {
"kind": "Date",
"value": "2022-05-13T10:20:22.000Z"
},
"urls": [],
"tags": [],
"meta": [],
"url": {
"kind": "Url",
"uri": "https://github.com/tercen/PTK_CV_Export_app"
},
"version": "0.0.2",
"authors": [],
"isPublic": false,
"projectId": "c845ceade32c4423bc616ff5ab22f158",
"folderId": "",
"links": [
{
"kind": "Link",
"id": "cc6a3b6a-2713-481c-b7ae-ef9940dded3a",
"inputId": "2732be46-956e-4c3a-979a-c1f1704fea8d-i-0",
"outputId": "82ef4820-9f6b-4204-9657-66650b921b27-o-0"
},
{
"kind": "Link",
"id": "816dcc76-64c3-4c95-9108-799c903fab6d",
"inputId": "f36e0da9-c0df-4aea-b8f7-c05716a379d7-i-0",
"outputId": "2732be46-956e-4c3a-979a-c1f1704fea8d-o-0"
},
{
"kind": "Link",
"id": "c715fd9c-feb9-43ea-a06d-3a2efb792c1f",
"inputId": "82ef4820-9f6b-4204-9657-66650b921b27-i-0",
"outputId": "e3f0441f-92e2-4f32-9467-c458a2259ba4-o-0"
}
],
"steps": [
{
"kind": "DataStep",
"id": "2732be46-956e-4c3a-979a-c1f1704fea8d",
"groupId": "",
"name": "Data step",
"inputs": [
{
"kind": "InputPort",
"id": "2732be46-956e-4c3a-979a-c1f1704fea8d-i-0",
"linkType": "relation",
"name": "data"
}
],
"outputs": [
{
"kind": "OutputPort",
"id": "2732be46-956e-4c3a-979a-c1f1704fea8d-o-0",
"linkType": "relation",
"name": "data"
}
],
"rectangle": {
"kind": "Rectangle",
"extent": {
"kind": "Point",
"x": 88.99000000000001,
"y": 55.0
},
"topLeft": {
"kind": "Point",
"x": 1135.3038919067385,
"y": 419.5
}
},
"state": {
"kind": "StepState",
"taskId": "",
"taskState": {
"kind": "InitState"
}
},
"model": {
"kind": "Crosstab",
"axis": {
"kind": "XYAxisList",
"rectangleSelections": [],
"xyAxis": [
{
"kind": "XYAxis",
"chart": {
"kind": "ChartPoint",
"name": "",
"properties": {
"kind": "Properties",
"properties": [],
"propertyValues": []
},
"pointSize": 4
},
"colors": {
"kind": "Colors",
"factors": [],
"palette": {
"kind": "CategoryPalette",
"backcolor": 0,
"properties": [],
"colorList": {
"kind": "ColorList",
"name": ""
},
"stringColorElements": []
}
},
"errors": {
"kind": "Errors",
"factors": []
},
"labels": {
"kind": "Labels",
"factors": []
},
"xAxis": {
"kind": "Axis",
"axisExtent": {
"kind": "Point",
"x": 80.0,
"y": 30.0
},
"axisSettings": {
"kind": "AxisSettings",
"properties": [],
"propertyValues": []
},
"graphicalFactor": {
"kind": "GraphicalFactor",
"factor": {
"kind": "Factor",
"name": "",
"type": "string"
},
"rectangle": {
"kind": "Rectangle",
"extent": {
"kind": "Point",
"x": 0.0,
"y": 0.0
},
"topLeft": {
"kind": "Point",
"x": 0.0,
"y": 0.0
}
}
}
},
"yAxis": {
"kind": "Axis",
"axisExtent": {
"kind": "Point",
"x": 80.0,
"y": 30.0
},
"axisSettings": {
"kind": "AxisSettings",
"properties": [],
"propertyValues": []
},
"graphicalFactor": {
"kind": "GraphicalFactor",
"factor": {
"kind": "Factor",
"name": "",
"type": "string"
},
"rectangle": {
"kind": "Rectangle",
"extent": {
"kind": "Point",
"x": 0.0,
"y": 0.0
},
"topLeft": {
"kind": "Point",
"x": 0.0,
"y": 0.0
}
}
}
},
"taskId": "",
"preprocessors": []
}
]
},
"columnTable": {
"kind": "CrosstabTable",
"cellSize": 250.0,
"offset": 0,
"graphicalFactors": [
{
"kind": "GraphicalFactor",
"factor": {
"kind": "Factor",
"name": "",
"type": "string"
},
"rectangle": {
"kind": "Rectangle",
"extent": {
"kind": "Point",
"x": 0.0,
"y": 0.0
},
"topLeft": {
"kind": "Point",
"x": 0.0,
"y": 0.0
}
}
}
],
"rectangleSelections": [],
"nRows": 1
},
"filters": {
"kind": "Filters",
"removeNaN": true,
"namedFilters": [
{
"kind": "NamedFilter",
"logical": "and",
"not": false,
"filterExprs": [
{
"kind": "FilterExpr",
"filterOp": "greater",
"stringValue": "0.249",
"factor": {
"kind": "Factor",
"name": "PTK QC.ds10.fractionPresent",
"type": "double"
}
}
],
"name": "+ fractionPresent > 0.249"
},
{
"kind": "NamedFilter",
"logical": "and",
"not": false,
"filterExprs": [
{
"kind": "FilterExpr",
"filterOp": "equals",
"stringValue": "94",
"factor": {
"kind": "Factor",
"name": "ds0.Cycle",
"type": "double"
}
}
],
"name": "+ Cycle = 94"
}
]
},
"operatorSettings": {
"kind": "OperatorSettings",
"namespace": "PTKCVEXPORT",
"operatorRef": {
"kind": "OperatorRef",
"name": "",
"version": "",
"operatorId": "",
"operatorKind": "",
"propertyValues": [],
"url": {
"kind": "Url",
"uri": ""
}
},
"environment": [],
"operatorModel": {
"kind": "OperatorModel"
}
},
"rowTable": {
"kind": "CrosstabTable",
"cellSize": 250.0,
"offset": 0,
"graphicalFactors": [
{
"kind": "GraphicalFactor",
"factor": {
"kind": "Factor",
"name": "ds1.ID",
"type": "string"
},
"rectangle": {
"kind": "Rectangle",
"extent": {
"kind": "Point",
"x": 80.0,
"y": 0.0
},
"topLeft": {
"kind": "Point",
"x": 0.0,
"y": 0.0
}
}
},
{
"kind": "GraphicalFactor",
"factor": {
"kind": "Factor",
"name": "ds0.Barcode",
"type": "string"
},
"rectangle": {
"kind": "Rectangle",
"extent": {
"kind": "Point",
"x": 110.0,
"y": 30.0
},
"topLeft": {
"kind": "Point",
"x": 0.0,
"y": 0.0
}
}
},
{
"kind": "GraphicalFactor",
"factor": {
"kind": "Factor",
"name": "ds0.Row",
"type": "double"
},
"rectangle": {
"kind": "Rectangle",
"extent": {
"kind": "Point",
"x": 70.0,
"y": 30.0
},
"topLeft": {
"kind": "Point",
"x": 0.0,
"y": 0.0
}
}
},
{
"kind": "GraphicalFactor",
"factor": {
"kind": "Factor",
"name": "js0.cv_group",
"type": "string"
},
"rectangle": {
"kind": "Rectangle",
"extent": {
"kind": "Point",
"x": 120.0,
"y": 30.0
},
"topLeft": {
"kind": "Point",
"x": 0.0,
"y": 0.0
}
}
},
{
"kind": "GraphicalFactor",
"factor": {
"kind": "Factor",
"name": "value",
"type": "double"
},
"rectangle": {
"kind": "Rectangle",
"extent": {
"kind": "Point",
"x": 50.0,
"y": 30.0
},
"topLeft": {
"kind": "Point",
"x": 0.0,
"y": 0.0
}
}
}
],
"rectangleSelections": [],
"nRows": 1
},
"taskId": ""
},
"computedRelation": {
"kind": "Relation",
"id": "641180d5-6356-4beb-b9ca-af5433d582ba"
},
"parentDataStepId": ""
},
{
"kind": "WizardStep",
"id": "82ef4820-9f6b-4204-9657-66650b921b27",
"groupId": "",
"name": "Wizard",
"inputs": [
{
"kind": "InputPort",
"id": "82ef4820-9f6b-4204-9657-66650b921b27-i-0",
"linkType": "relation",
"name": "table"
}
],
"outputs": [
{
"kind": "OutputPort",
"id": "82ef4820-9f6b-4204-9657-66650b921b27-o-0",
"linkType": "relation",
"name": "table"
}
],
"rectangle": {
"kind": "Rectangle",
"extent": {
"kind": "Point",
"x": 88.99000000000001,
"y": 55.0
},
"topLeft": {
"kind": "Point",
"x": 1137.3038919067385,
"y": 315.5
}
},
"state": {
"kind": "StepState",
"taskId": "",
"taskState": {
"kind": "InitState"
}
},
"model": {
"kind": "WizardStepModel",
"namespace": "ws0",
"description": "",
"appDesignType": "",
"factors": [
{
"kind": "MappingFactor",
"name": "ds1.ID",
"type": "string",
"isSingle": false,
"description": "Select the peptide identifier.\n\nExample:\n\n- ID",
"factorName": "Peptide",
"factors": [
{
"kind": "Factor",
"name": "ds1.ID",
"type": "string"
}
],
"isRequired": true
},
{
"kind": "MappingFactor",
"name": "js0.cv_group",
"type": "string",
"isSingle": false,
"description": "Select the factor beloning to the CV group",
"factorName": "CV Group",
"factors": [
{
"kind": "Factor",
"name": "js0.cv_group",
"type": "string"
}
],
"isRequired": true
},
{
"kind": "MappingFactor",
"name": "value",
"type": "double",
"isSingle": false,
"description": "Select the values to use in the computation.\n\nExample:\n\n- log transform of S100",
"factorName": "Quantitation Type",
"factors": [
{
"kind": "Factor",
"name": "ds6.logTransformed",
"type": "double"
}
],
"isRequired": true
}
],
"filters": [
{
"kind": "MappingFilter",
"name": "+ fractionPresent > 0.249",
"description": "",
"namedFilter": {
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"logical": "and",
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