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_callGenericToolOrToolArray parameters are not evaluated #105

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vinjana opened this issue Sep 22, 2017 · 1 comment
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_callGenericToolOrToolArray parameters are not evaluated #105

vinjana opened this issue Sep 22, 2017 · 1 comment
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RoddyCore

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@vinjana
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vinjana commented Sep 22, 2017

In de.dkfz.roddy.knowledge.methods.GenericMethod#_callGenericToolOrToolArray the non/basefile parameters are not evaluated.

E.g. in the ACEseq WF

        "CHR_NR" -> "${PARM_CHR_INDEX}"
@vinjana vinjana added the bug label Sep 22, 2017
@vinjana vinjana added this to Backlog in RoddyCore Sep 26, 2017
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vinjana commented Sep 27, 2017

Fixed with TheRoddyWMS/BatchEuphoria#61.

@vinjana vinjana closed this as completed Sep 27, 2017
@vinjana vinjana moved this from Backlog to Done in RoddyCore Sep 27, 2017
@vinjana vinjana mentioned this issue Sep 29, 2017
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