vtkImageSlab.cxx

/*=========================================================================

  Program:   Visualization Toolkit
  Module:    vtkImageSlab.cxx

  Copyright (c) Ken Martin, Will Schroeder, Bill Lorensen
  All rights reserved.
  See Copyright.txt or http://www.kitware.com/Copyright.htm for details.

     This software is distributed WITHOUT ANY WARRANTY; without even
     the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR
     PURPOSE.  See the above copyright notice for more information.

=========================================================================*/

#include "vtkImageSlab.h"

#include "vtkImageData.h"
#include "vtkStreamingDemandDrivenPipeline.h"
#include "vtkObjectFactory.h"
#include "vtkInformationVector.h"
#include "vtkInformation.h"
#include "vtkMath.h"
#include "vtkTypeTraits.h"

#include "vtkTemplateAliasMacro.h"
// turn off 64-bit ints when templating over all types, since
// they cannot be stored in "double" without loss of precision
# undef VTK_USE_INT64
# define VTK_USE_INT64 0
# undef VTK_USE_UINT64
# define VTK_USE_UINT64 0

#include <cmath>

vtkStandardNewMacro(vtkImageSlab);

//----------------------------------------------------------------------------
vtkImageSlab::vtkImageSlab()
{
  this->Operation = VTK_IMAGE_SLAB_MEAN;
  this->TrapezoidIntegration = 0;
  this->Orientation = 2;
  this->SliceRange[0] = VTK_INT_MIN;
  this->SliceRange[1] = VTK_INT_MAX;
  this->OutputScalarType = 0;
  this->MultiSliceOutput = 0;
}

//----------------------------------------------------------------------------
vtkImageSlab::~vtkImageSlab()
{
}

//----------------------------------------------------------------------------
int vtkImageSlab::RequestInformation(
  vtkInformation *, vtkInformationVector **inputVector,
  vtkInformationVector *outputVector)
{
  int extent[6];
  int range[2];
  double origin[3];
  double spacing[3];
  double sliceSpacing;
  int dimIndex;
  int scalarType;

  vtkInformation *outInfo = outputVector->GetInformationObject(0);
  vtkInformation *inInfo = inputVector[0]->GetInformationObject(0);

  inInfo->Get(vtkStreamingDemandDrivenPipeline::WHOLE_EXTENT(), extent);
  inInfo->Get(vtkDataObject::SPACING(), spacing);
  inInfo->Get(vtkDataObject::ORIGIN(), origin);

  // get the direction along which to sum slices
  dimIndex = this->GetOrientation();

  // clamp the range to the whole extent
  this->GetSliceRange(range);
  if (range[0] < extent[2*dimIndex])
  {
    range[0] = extent[2*dimIndex];
  }
  if (range[1] > extent[2*dimIndex+1])
  {
    range[1] = extent[2*dimIndex+1];
  }

  // set new origin to be in the center of the stack of slices
  sliceSpacing = spacing[dimIndex];
  origin[dimIndex] = (origin[dimIndex] +
                      0.5*sliceSpacing*(range[0] + range[1]));

  if (this->GetMultiSliceOutput())
  {
    // output extent is input extent, decreased by the slice range
    extent[2*dimIndex] -= range[0];
    extent[2*dimIndex+1] -= range[1];
  }
  else
  {
    // set new extent to single-slice
    extent[2*dimIndex] = 0;
    extent[2*dimIndex+1] = 0;
  }

  // set the output scalar type
  scalarType = this->GetOutputScalarType();

  // set the output information
  outInfo->Set(vtkStreamingDemandDrivenPipeline::WHOLE_EXTENT(),
    extent, 6);
  outInfo->Set(vtkDataObject::SPACING(), spacing, 3);
  outInfo->Set(vtkDataObject::ORIGIN(), origin, 3);

  // if requested, change the type to float or double
  if (scalarType == VTK_FLOAT || scalarType == VTK_DOUBLE)
  {
    vtkDataObject::SetPointDataActiveScalarInfo(outInfo, scalarType, -1);
  }

  return 1;
}

//----------------------------------------------------------------------------
int vtkImageSlab::RequestUpdateExtent(
  vtkInformation *, vtkInformationVector **inputVector,
  vtkInformationVector *outputVector)
{
  int outExt[6];
  int inExt[6];
  int extent[6];
  int range[2];
  int dimIndex;

  vtkInformation *outInfo = outputVector->GetInformationObject(0);
  vtkInformation *inInfo = inputVector[0]->GetInformationObject(0);

  outInfo->Get(vtkStreamingDemandDrivenPipeline::UPDATE_EXTENT(), outExt);
  inInfo->Get(vtkStreamingDemandDrivenPipeline::WHOLE_EXTENT(), extent);

  // initialize input extent to output extent
  inExt[0] = outExt[0];
  inExt[1] = outExt[1];
  inExt[2] = outExt[2];
  inExt[3] = outExt[3];
  inExt[4] = outExt[4];
  inExt[5] = outExt[5];

  // get the direction along which to sum slices
  dimIndex = this->GetOrientation();

  // clamp the range to the whole extent
  this->GetSliceRange(range);
  if (range[0] < extent[2*dimIndex])
  {
    range[0] = extent[2*dimIndex];
  }
  if (range[1] > extent[2*dimIndex+1])
  {
    range[1] = extent[2*dimIndex+1];
  }

  // input range is the output range plus the specified slice range
  inExt[2*dimIndex] += range[0];
  inExt[2*dimIndex+1] += range[1];

  inInfo->Set(vtkStreamingDemandDrivenPipeline::UPDATE_EXTENT(), inExt, 6);

  return 1;
}

// anonymous namespace to limit visibility
namespace {

//----------------------------------------------------------------------------
// rounding functions for each type

template<class T>
void vtkSlabRound(double val, T& rnd)
{
  rnd = static_cast<T>(vtkMath::Floor(val + 0.5));
}

template<>
void vtkSlabRound<vtkTypeUInt32>(double val, vtkTypeUInt32& rnd)
{
  rnd = static_cast<vtkTypeUInt32>(val + 0.5);
}

template<>
void vtkSlabRound<vtkTypeFloat32>(double val, vtkTypeFloat32& rnd)
{
  rnd = val;
}

template<>
void vtkSlabRound<vtkTypeFloat64>(double val, vtkTypeFloat64& rnd)
{
  rnd = val;
}

//----------------------------------------------------------------------------
// clamping functions for each type

template<class T>
void vtkSlabClamp(double val, T& clamp)
{
  double minval = static_cast<double>(vtkTypeTraits<T>::Min());
  double maxval = static_cast<double>(vtkTypeTraits<T>::Max());
  val = (val > minval ? val : minval);
  val = (val < maxval ? val : maxval);
  vtkSlabRound(val, clamp);
}

template<>
void vtkSlabClamp<vtkTypeFloat32>(double val, float& clamp)
{
  clamp = val;
}

template<>
void vtkSlabClamp<vtkTypeFloat64>(double val, double& clamp)
{
  clamp = val;
}

//----------------------------------------------------------------------------
template <class T1, class T2>
void vtkImageSlabExecute(vtkImageSlab *self,
                         vtkImageData *inData, T1 *inPtr,
                         vtkImageData *outData, T2 *outPtr,
                         int outExt[6], int id)
{
  vtkIdType outIncX, outIncY, outIncZ;
  vtkIdType inInc[3];
  int inExt[6];

  // get increments to march through data
  inData->GetExtent(inExt);
  inData->GetIncrements(inInc);
  outData->GetContinuousIncrements(outExt, outIncX, outIncY, outIncZ);
  int numscalars = inData->GetNumberOfScalarComponents();
  int rowlen = (outExt[1] - outExt[0] + 1)*numscalars;

  // get the operation
  int operation = self->GetOperation();
  int trapezoid = self->GetTrapezoidIntegration();

  // get the dimension along which to do the projection
  int dimIndex = self->GetOrientation();
  if (dimIndex < 0)
  {
    dimIndex = 0;
  }
  else if (dimIndex > 2)
  {
    dimIndex = 2;
  }

  // clamp the range to the whole extent
  int range[2];
  self->GetSliceRange(range);
  if (range[0] < inExt[2*dimIndex])
  {
    range[0] = inExt[2*dimIndex];
  }
  if (range[1] > inExt[2*dimIndex+1])
  {
    range[1] = inExt[2*dimIndex+1];
  }
  int numSlices = range[1] - range[0] + 1;

  // trapezoid integration is impossible if only one slice
  if (numSlices <= 1)
  {
    trapezoid = 0;
  }

  // averaging requires double precision summation
  double *rowBuffer = nullptr;
  if (operation == VTK_IMAGE_SLAB_MEAN ||
      operation == VTK_IMAGE_SLAB_SUM)
  {
    rowBuffer = new double[rowlen];
  }

  unsigned long count = 0;
  unsigned long target = ((unsigned long)(outExt[3]-outExt[2]+1)
                          *(outExt[5]-outExt[4]+1));
  target++;

  // Loop through output pixels
  for (int idZ = outExt[4]; idZ <= outExt[5]; idZ++)
  {
    T1 *inPtrY = inPtr;
    for (int idY = outExt[2]; idY <= outExt[3]; idY++)
    {
      if (!id)
      {
        if (!(count%target))
        {
          self->UpdateProgress(count/(1.0*target));
        }
        count++;
      }

      // ====== code for handling average and sum ======
      if (operation == VTK_IMAGE_SLAB_MEAN ||
          operation == VTK_IMAGE_SLAB_SUM)
      {
        T1 *inSlicePtr = inPtrY;
        double *rowPtr = rowBuffer;

        // initialize using first row
        T1 *inPtrX = inSlicePtr;
        if (trapezoid)
        {
          double f = 0.5;
          for (int j = 0; j < rowlen; j++)
          {
            *rowPtr++ = f*(*inPtrX++);
          }
        }
        else
        {
          for (int j = 0; j < rowlen; j++)
          {
            *rowPtr++ = *inPtrX++;
          }
        }
        inSlicePtr += inInc[dimIndex];

        // perform the summation
        int sumSlices = (trapezoid ? (numSlices-1) : numSlices);
        for (int sliceIdx = 1; sliceIdx < sumSlices; sliceIdx++)
        {
          inPtrX = inSlicePtr;
          rowPtr = rowBuffer;

          for (int i = 0; i < rowlen; i++)
          {
            *rowPtr++ += *inPtrX++;
          }
          inSlicePtr += inInc[dimIndex];
        }

        if (trapezoid)
        {
          inPtrX = inSlicePtr;
          rowPtr = rowBuffer;

          double f = 0.5;
          for (int i = 0; i < rowlen; i++)
          {
            *rowPtr++ += f*(*inPtrX++);
          }
        }

        rowPtr = rowBuffer;
        if (operation == VTK_IMAGE_SLAB_MEAN)
        {
          // do the division via multiplication
          double factor = 1.0/sumSlices;
          for (int k = 0; k < rowlen; k++)
          {
            vtkSlabRound((*rowPtr++)*factor, *outPtr++);
          }
        }
        else // VTK_IMAGE_SLAB_SUM
        {
          // clamp to limits of numeric type
          for (int k = 0; k < rowlen; k++)
          {
            vtkSlabClamp(*rowPtr++, *outPtr++);
          }
        }
      }

      // ====== code for handling max and min ======
      else
      {
        T1 *inSlicePtr = inPtrY;
        T2 *outPtrX = outPtr;

        // initialize using first row
        T1 *inPtrX = inSlicePtr;
        for (int j = 0; j < rowlen; j++)
        {
          *outPtrX++ = *inPtrX++;
        }
        inSlicePtr += inInc[dimIndex];

        if (operation == VTK_IMAGE_SLAB_MIN)
        {
          for (int sliceIdx = 1; sliceIdx < numSlices; sliceIdx++)
          {
            inPtrX = inSlicePtr;
            outPtrX = outPtr;

            for (int i = 0; i < rowlen; i++)
            {
              *outPtrX = ((*outPtrX < *inPtrX) ? *outPtrX : *inPtrX);
              inPtrX++;
              outPtrX++;
            }

            inSlicePtr += inInc[dimIndex];
          }
        }
        else // VTK_IMAGE_SLAB_MAX
        {
          for (int sliceIdx = 1; sliceIdx < numSlices; sliceIdx++)
          {
            inPtrX = inSlicePtr;
            outPtrX = outPtr;

            for (int i = 0; i < rowlen; i++)
            {
              *outPtrX = ((*outPtrX > *inPtrX) ? *outPtrX : *inPtrX);
              inPtrX++;
              outPtrX++;
            }

            inSlicePtr += inInc[dimIndex];
          }
        }

        outPtr += rowlen;
      }

      // ====== end of operation-specific code ======

      outPtr += outIncY;
      inPtrY += inInc[1];
    }

    outPtr += outIncZ;
    inPtr += inInc[2];
  }

  if (operation == VTK_IMAGE_SLAB_MEAN ||
      operation == VTK_IMAGE_SLAB_SUM)
  {
    delete [] rowBuffer;
  }
}

} // end of anonymous namespace

//----------------------------------------------------------------------------
void vtkImageSlab::ThreadedRequestData(vtkInformation *,
  vtkInformationVector **inVector, vtkInformationVector *,
  vtkImageData ***inData, vtkImageData **outData, int outExt[6], int id)
{
  void *inPtr;
  void *outPtr;
  int inExt[6];
  int extent[6];
  int dimIndex;
  int range[2];

  vtkDebugMacro("Execute: inData = " << inData << ", outData = " << outData);

  // get the direction along which to sum slices
  dimIndex = this->GetOrientation();

  // clamp the range to the whole extent
  vtkInformation *inInfo = inVector[0]->GetInformationObject(0);
  inInfo->Get(vtkStreamingDemandDrivenPipeline::WHOLE_EXTENT(), extent);
  this->GetSliceRange(range);
  if (range[0] < extent[2*dimIndex])
  {
    range[0] = extent[2*dimIndex];
  }
  if (range[1] > extent[2*dimIndex+1])
  {
    range[1] = extent[2*dimIndex+1];
  }

  // initialize input extent to output extent
  inExt[0] = outExt[0];
  inExt[1] = outExt[1];
  inExt[2] = outExt[2];
  inExt[3] = outExt[3];
  inExt[4] = outExt[4];
  inExt[5] = outExt[5];

  // the adjust for the slice range
  inExt[2*dimIndex] += range[0];
  inExt[2*dimIndex+1] += range[1];

  // now get the pointers for the extents
  inPtr = inData[0][0]->GetScalarPointerForExtent(inExt);
  outPtr = outData[0]->GetScalarPointerForExtent(outExt);

  // get the scalar type
  int outScalarType = outData[0]->GetScalarType();
  int inScalarType = inData[0][0]->GetScalarType();

  // and call the execute method
  if (outScalarType == inScalarType)
  {
    switch (inScalarType)
    {
      vtkTemplateAliasMacro(
        vtkImageSlabExecute(this,
          inData[0][0], static_cast<VTK_TT *>(inPtr),
          outData[0], static_cast<VTK_TT *>(outPtr), outExt, id));
      default:
        vtkErrorMacro("Execute: Unknown ScalarType");
        return;
    }
  }
  else if (outScalarType == VTK_FLOAT)
  {
    switch (inScalarType)
    {
      vtkTemplateAliasMacro(
        vtkImageSlabExecute( this,
          inData[0][0], static_cast<VTK_TT *>(inPtr),
          outData[0], static_cast<float *>(outPtr), outExt, id));
      default:
        vtkErrorMacro("Execute: Unknown ScalarType");
        return;
    }
  }
  else if (outScalarType == VTK_DOUBLE)
  {
    switch (inScalarType)
    {
      vtkTemplateAliasMacro(
        vtkImageSlabExecute(this,
          inData[0][0], static_cast<VTK_TT *>(inPtr),
          outData[0], static_cast<double *>(outPtr), outExt, id));
      default:
        vtkErrorMacro("Execute: Unknown ScalarType");
        return;
    }
  }
  else
  {
    vtkErrorMacro("Execute: Unknown ScalarType");
    return;
  }
}

//----------------------------------------------------------------------------
void vtkImageSlab::PrintSelf(ostream& os, vtkIndent indent)
{
  this->Superclass::PrintSelf(os, indent);

  os << indent << "Operation: " << this->GetOperationAsString() << "\n";
  os << indent << "TrapezoidIntegration: "
     << (this->TrapezoidIntegration ? "On\n" : "Off\n");
  os << indent << "Orientation: " << this->GetOrientation() << "\n";
  os << indent << "SliceRange: " << this->GetSliceRange()[0] << " "
     << this->GetSliceRange()[1] << "\n";
  os << indent << "OutputScalarType: " << this->OutputScalarType << "\n";
  os << indent << "MultiSliceOutput: "
     << (this->MultiSliceOutput ? "On\n" : "Off\n");
}

//----------------------------------------------------------------------------
const char *vtkImageSlab::GetOperationAsString()
{
  switch (this->Operation)
  {
    case VTK_IMAGE_SLAB_MIN:
      return "Min";
    case VTK_IMAGE_SLAB_MAX:
      return "Max";
    case VTK_IMAGE_SLAB_MEAN:
      return "Mean";
    case VTK_IMAGE_SLAB_SUM:
      return "Sum";
    default:
      return "";
  }
}