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tidy for summary() from package 'mediation' #275

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douglas24 opened this issue Feb 2, 2018 · 3 comments
Closed

tidy for summary() from package 'mediation' #275

douglas24 opened this issue Feb 2, 2018 · 3 comments

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@douglas24
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Please add this? broom/tidy doesn't seem to work already with the summary() for the 'mediation' package in R

@IndrajeetPatil
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This is already supported in broom-

library(mediation)
#> Loading required package: MASS
#> Loading required package: Matrix
#> Loading required package: mvtnorm
#> Loading required package: sandwich
#> mediation: Causal Mediation Analysis
#> Version: 4.4.6
library(broom)
data(jobs)

b <- lm(job_seek ~ treat + econ_hard + sex + age, data = jobs)
c <- lm(depress2 ~ treat + job_seek + econ_hard + sex + age, data = jobs)
mod <- mediate(b, c, sims = 50, treat = "treat", mediator = "job_seek")

tidy(mod)
#> # A tibble: 4 x 4
#>   term   estimate std.error p.value
#>   <chr>     <dbl>     <dbl>   <dbl>
#> 1 acme_0  -0.0131   0.00943    0.12
#> 2 acme_1  -0.0131   0.00943    0.12
#> 3 ade_0   -0.0444   0.0397     0.36
#> 4 ade_1   -0.0444   0.0397     0.36
tidy(summary(mod))
#> # A tibble: 4 x 4
#>   term   estimate std.error p.value
#>   <chr>     <dbl>     <dbl>   <dbl>
#> 1 acme_0  -0.0131   0.00943    0.12
#> 2 acme_1  -0.0131   0.00943    0.12
#> 3 ade_0   -0.0444   0.0397     0.36
#> 4 ade_1   -0.0444   0.0397     0.36

Created on 2019-03-10 by the reprex package (v0.2.1.9000)

Session info
devtools::session_info()
#> - Session info ----------------------------------------------------------
#>  setting  value                                             
#>  version  R Under development (unstable) (2019-03-02 r76189)
#>  os       Windows 10 x64                                    
#>  system   x86_64, mingw32                                   
#>  ui       RTerm                                             
#>  language (EN)                                              
#>  collate  English_United States.1252                        
#>  ctype    English_United States.1252                        
#>  tz       America/Chicago                                   
#>  date     2019-03-10                                        
#> 
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#>  callr          3.1.1      2018-12-21 [1]
#>  checkmate      1.9.1      2019-01-15 [1]
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#>  MASS         * 7.3-51.2   2019-03-01 [2]
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#>  mediation    * 4.4.6      2017-07-11 [1]
#>  memoise        1.1.0      2017-04-21 [1]
#>  minqa          1.2.4      2014-10-09 [1]
#>  munsell        0.5.0      2018-06-12 [1]
#>  mvtnorm      * 1.0-10     2019-03-05 [1]
#>  nlme           3.1-137    2018-04-07 [2]
#>  nloptr         1.2.1      2018-10-03 [1]
#>  nnet           7.3-12     2016-02-02 [2]
#>  pillar         1.3.1      2018-12-15 [1]
#>  pkgbuild       1.0.2      2018-10-16 [1]
#>  pkgconfig      2.0.2      2018-08-16 [1]
#>  pkgload        1.0.2      2018-10-29 [1]
#>  prettyunits    1.0.2      2015-07-13 [1]
#>  processx       3.2.1      2018-12-05 [1]
#>  ps             1.3.0      2018-12-21 [1]
#>  purrr          0.3.1      2019-03-03 [1]
#>  R6             2.4.0      2019-02-14 [1]
#>  RColorBrewer   1.1-2      2014-12-07 [1]
#>  Rcpp           1.0.0      2018-11-07 [1]
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#>  rlang          0.3.1      2019-01-08 [1]
#>  rmarkdown      1.11.6     2019-02-14 [1]
#>  rpart          4.1-13     2018-02-23 [2]
#>  rprojroot      1.3-2      2018-01-03 [1]
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#>  utf8           1.1.4      2018-05-24 [1]
#>  vctrs          0.1.0.9002 2019-03-07 [1]
#>  withr          2.1.2      2018-03-15 [1]
#>  xfun           0.5        2019-02-20 [1]
#>  yaml           2.2.0      2018-07-25 [1]
#>  zeallot        0.1.0      2018-01-28 [1]
#>  zoo            1.8-4      2018-09-19 [1]
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#> 
#> [1] C:/Users/inp099/Documents/R/win-library/3.6
#> [2] C:/Program Files/R/R-devel/library

@alexpghayes
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We have this! It isn't super clear but that's another issue

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