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mkdocs.yml
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mkdocs.yml
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theme:
name: material
features:
- navigation.sections # Sections are included in the navigation on the left.
- toc.integrate # Table of contents is integrated on the left; does not appear separately on the right.
- header.autohide # header disappears as you scroll
site_name: PyDTS
site_description: The documentation for the PyDTS software library.
site_author: Tomer Meir, Rom Gutman
repo_url: https://github.com/tomer1812/pydts/
repo_name: tomer1812/pydts
edit_uri: "" # No edit button, as some of our pages are in /docs and some in /examples_utils via symlink, so it's impossible for them all to be accurate
strict: false # Don't allow warnings during the build process
markdown_extensions:
- pymdownx.highlight:
anchor_linenums: true
- pymdownx.inlinehilite
- pymdownx.arithmatex: # Render LaTeX via MathJax
generic: true
- pymdownx.superfences # Seems to enable syntax highlighting when used with the Material theme.
- pymdownx.details # Allowing hidden expandable regions denoted by ???
- pymdownx.snippets: # Include one Markdown file into another
base_path: docs
- admonition
- toc:
permalink: "¤" # Adds a clickable permalink to each section heading
toc_depth: 4 # Prevents h5, h6 from showing up in the TOC.
extra_javascript:
- javascripts/mathjax.js
- https://polyfill.io/v3/polyfill.min.js?features=es6
- https://cdn.jsdelivr.net/npm/mathjax@3/es5/tex-mml-chtml.js
nav:
- Home: 'index.md'
- Introduction: intro.md
- Methods:
- Introduction: methodsintro.md
- Definitions and Estimation: methods.md
- Evaluation Metrics: methodsevaluation.md
- Examples:
- Event Times Sampler: EventTimesSampler.ipynb
- Estimation Example:
- Introduction: UsageExample-Intro.ipynb
- Data Preparation: UsageExample-DataPreparation.ipynb
- Estimation with TwoStagesFitter: UsageExample-FittingTwoStagesFitter.ipynb
- Estimation with DataExpansionFitter: UsageExample-FittingDataExpansionFitter.ipynb
- Data Regrouping Example: UsageExample-RegroupingData.ipynb
- Comparing the Estimation Methods: ModelsComparison.ipynb
- Evaluation: PerformanceMeasures.ipynb
- Regularization: Regularization.ipynb
- Hospitalization LOS Simulation: SimulatedDataset.ipynb
- API:
- The Two Stages Procedure of Meir and Gorfine (2023): 'api/two_stages_fitter.md'
- Data Expansion Procedure of Lee et al. (2018): 'api/data_expansion_fitter.md'
- Event Times Sampler: 'api/event_times_sampler.md'
- Evaluation: 'api/evaluation.md'
- Cross Validation: 'api/cross_validation.md'
- Model Selection: 'api/model_selection.md'
plugins:
- mknotebooks
- search
- mkdocstrings
extra:
copyright: Copyright © 2022 Tomer Meir, Rom Gutman, Malka Gorfine
analytics:
provider: google
property: G-Z0XYP3868P