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lumaviewpro.kv
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lumaviewpro.kv
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#:kivy 2.1.0
#: import GLShaderLexer pygments.lexers.GLShaderLexer
#-------------------------------------------------------------------------------
# MIT License
#
# Copyright (c) 2023 Etaluma, Inc.
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, including without limitation the rights
# to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
# copies of the Software, and to permit persons to whom the Software is
# furnished to do so, subject to the following conditions:
#
# The above copyright notice and this permission notice shall be included in all
# copies or substantial portions of the Software.
#
# THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
# IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
# FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
# AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
# LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
# OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
# SOFTWARE.
#-------------------------------------------------------------------------------
#-------------------------------------------------------------------------------
# This open source software was developed for use with Etaluma microscopes.
#
# AUTHORS:
# Kevin Peter Hickerson, The Earthineering Company
# Anna Iwaniec Hickerson, Keck Graduate Institute
# Gerard Decker, The Earthineering Company
#
# MODIFIED:
# April 15, 2023
#-------------------------------------------------------------------------------
# -----------------------
# MAIN DISPLAY
# -----------------------
<MainDisplay>:
id: maindisplay_id
# Primary Display of Camera Results
ShaderViewer:
id: viewer_id
pos: 0, 0
size_hint: None, None
size: root.width, root.height
auto_bring_to_front: False
do_rotation: False
do_translation: True
MotionSettings:
id: motionsettings_id
size_hint: None, None
size: self.settings_width, root.height
pos: -self.settings_width+30, 0
ImageSettings:
id: imagesettings_id
size_hint: None, None
size: self.settings_width, root.height
pos: root.width-30, 0
# Camera Controls
# ------------------------------
BoxLayout:
orientation: 'horizontal'
padding: '5dp'
spacing: '5dp'
pos: (root.width-7*40)/2, 0
FolderChooseBTN:
id: live_folder_btn
border: 0, 0, 0, 0
background_normal: './data/icons/folder.png' # Press to Select Folder
background_down: './data/icons/folder_down.png'
size_hint: None, None
size: '40dp', '40dp'
on_release: self.choose('live_folder')
ToggleButton:
id: live_btn
border: 0, 0, 0, 0
background_normal: './data/icons/pause.png' # Press to Pause Live Stream
background_down: './data/icons/play.png' # Press to Play Live Stream
size_hint: None, None
size: '40dp', '40dp'
state: 'normal'
on_release: root.cam_toggle()
Button:
id: capture_btn
border: 0, 0, 0, 0
background_normal: './data/icons/capture.png' # Press to Capture Image
background_down: './data/icons/capture_down.png'
size_hint: None, None
size: '40dp', '40dp'
on_release: root.live_capture()
ToggleButton:
id: composite_btn
border: 0, 0, 0, 0
background_normal: './data/icons/composite.png' # Press to Capture Composite Image
background_down: './data/icons/composite_down.png'
size_hint: None, None
size: '40dp', '40dp'
on_release: root.composite_capture()
ToggleButton:
id: record_btn
border: 0, 0, 0, 0
background_normal: './data/icons/record.png' # Press to Record Live Stream
background_down: './data/icons/stop.png' # Press to Stop Recording
size_hint: None, None
size: '40dp', '40dp'
on_press: root.record()
Button:
id: fit_btn
border: 0, 0, 0, 0
background_normal: './data/icons/fit.png' # Press to Fit Image to Window
background_down: './data/icons/fit_down.png'
size_hint: None, None
size: '40dp', '40dp'
on_release: root.fit_image()
Button:
id: one2one_btn
border: 0, 0, 0, 0
background_normal: './data/icons/one2one.png' # Press to Scale Image Pixels 1:1 with Screen
background_down: './data/icons/one2one_down.png'
size_hint: None, None
size: '40dp', '40dp'
on_release: root.one2one_image()
# ShaderViewer - Shaded Live Camera view
# ------------------------------------------
<ShaderViewer>:
ScopeDisplay:
id: scope_display_id
size_hint: None, None
size: root.width, root.height
allow_stretch: True
keep_ratio: True
# ShaderEditor - view and edit shader code
# ------------------------------------------
<ShaderEditor>:
orientation: 'horizontal'
BoxLayout:
orientation: 'vertical'
# Fragment Shader Editor
Label:
text: 'Fragment Shader'
size_hint_y: None
height: self.texture_size[1] + 10
CodeInput:
text: root.fs
lexer: GLShaderLexer()
on_text: root.fs = args[1]
# Vertex Shader Editor
Label:
text: 'Vertex Shader'
size_hint_y: None
height: self.texture_size[1] + 10
CodeInput:
text: root.vs
lexer: GLShaderLexer()
on_text: root.vs = args[1]
ToggleButton:
id: toggle_editor
size_hint: None, None
size: 30, 60
pos_hint: {"x":0, "y":0.5}
border: 0, 0, 0, 0
background_normal: './data/icons/right_arrow_right_arc.png'
background_down: './data/icons/left_arrow_right_arc.png'
on_press: root.toggle_editor()
<AccordionItemXyStageControl>:
title: 'XY Stage Control'
id: motionsettings_xystage_control_accordion_item_id
XYStageControl:
id: xy_stagecontrol_id
# MotionSettings - view and control motion control Board
# ------------------------------------------
<MotionSettings>:
orientation: 'horizontal'
Accordion:
orientation: 'vertical'
id: motionsettings_accordion_id
# MICROSCOPE SETTINGS
AccordionItem:
title: 'Microscope Settings'
collapse: False
MicroscopeSettings:
id: microscope_settings_id
# FOCUS SETTINGS
AccordionItem:
title: 'Objective Control'
VerticalControl:
id: verticalcontrol_id
# PROTOCOL SETTINGS
AccordionItem:
title: 'Protocol'
ProtocolSettings:
id: protocol_settings_id
# POST PROCESSING
AccordionItem:
title: 'Post Processing'
PostProcessingAccordion:
id: post_processing_id
ToggleButton:
id: toggle_motionsettings
size_hint: None, None
size: 30, 60
pos_hint: {"x":0, "y":0.5}
border: 0, 0, 0, 0
background_normal: './data/icons/right_arrow_right_arc.png' # right pointing (press to open)
background_down: './data/icons/left_arrow_right_arc.png' # left pointing (press to close)
on_press: root.toggle_settings()
<VerticalControl>:
orientation: 'vertical'
padding: '5dp'
spacing: '5dp'
canvas:
Color:
rgba: 0.1, 0.1, 0.1, 0.7
Rectangle:
size: self.size
pos: self.pos
Label:
text:'Adjust Focus'
font_size: '16sp'
size_hint_y: None
height: '30dp'
spacing: '5dp'
color: [51/255, 181/255, 229/255, 1]
BoxLayout:
orientation: 'horizontal'
size_hint_y: None
height: '170dp'
BoxLayout:
orientation: 'vertical'
size_hint_x: None
width: '40dp'
spacing: '5dp'
Label:
Button:
id: fast_up
border: 0, 0, 0, 0
size_hint: None, None
size: '30dp', '40dp'
background_normal: './data/icons/UU_normal.png'
background_down: './data/icons/UU_down.png'
on_release: root.coarse_up()
Button:
id: slow_up
border: 0, 0, 0, 0
size_hint: None, None
size: '30dp', '30dp'
background_normal: './data/icons/U_normal.png'
background_down: './data/icons/U_down.png'
on_release: root.fine_up()
Button:
id: slow_down
border: 0, 0, 0, 0
size_hint: None, None
size: '30dp', '30dp'
background_normal: './data/icons/D_normal.png'
background_down: './data/icons/D_down.png'
on_release: root.fine_down()
Button:
id: fast_down
border: 0, 0, 0, 0
size_hint: None, None
size: '30dp', '40dp'
background_normal: './data/icons/DD_normal.png'
background_down: './data/icons/DD_down.png'
on_release: root.coarse_down()
Label:
BoxLayout:
orientation: 'vertical'
size_hint_x: None
width: '40dp'
Label:
size_hint_y: None
height: '15dp'
ModSlider:
id: obj_position
orientation: 'vertical'
min: 0.
max: 14000.
value: 0.
step: 0.1
cursor_size: '30dp','40dp'
cursor_image: './data/icons/objective.png'
cursor_disabled_image: './data/icons/objective.png'
value_track: True
value_track_color: 51/255, 181/255, 229/255, 1
value_track_width: '5dp'
disabled: False
on_release: root.set_position(self.value)
Label:
size_hint_y: None
height: '15dp'
BoxLayout:
orientation: 'vertical'
padding: '5dp'
spacing: '5dp'
Label:
size_hint_y: None
height: '20dp'
halign: 'center'
font_size: '12sp'
text: 'Z-Position (um)'
TextInput:
id: z_position_id
multiline: False
size_hint_y: None
height: '30dp'
font_size: '12sp'
halign: 'center'
input_filter: 'float'
text: format(obj_position.value, '.2f')
on_text_validate: root.set_position(self.text)
on_focus: if not self.focus: root.set_position(self.text)
BoxLayout:
orientation:'horizontal'
padding: '0dp'
spacing: '5dp'
Button:
id: home_id
size_hint_y: None
height: '30dp'
font_size: '12sp'
text: 'Home'
on_release: root.home()
Button:
text: 'Set Z'
size_hint_y: None
height: '30dp'
font_size: '12sp'
on_release: root.set_bookmark()
Button:
text: 'Set All Z'
size_hint_y: None
height: '30dp'
font_size: '12sp'
on_release: root.set_all_bookmarks()
Button:
text: 'Go to Set Z'
size_hint_y: None
height: '30dp'
font_size: '12sp'
on_release: root.goto_bookmark()
ToggleButton:
id: autofocus_id
size_hint_y: None
height: '30dp'
font_size: '12sp'
text: 'Autofocus'
on_release: root.autofocus()
Label:
text:'Turret Selection'
id: turret_selection_label
font_size: '16sp'
size_hint_y: None if self.visible else 0
height: '30dp' if self.visible else 0
opacity: 1 if self.visible else 0
disabled: not self.visible
spacing: '5dp'
color: [51/255, 181/255, 229/255, 1]
visible: True
BoxLayout:
orientation: 'horizontal'
id: turret_btn_box
size_hint_y: None if self.visible else 0
height: '30dp' if self.visible else 0
opacity: 1 if self.visible else 0
disabled: not self.visible
visible: True
ToggleButton:
id: turret_pos_1_btn
text: '1'
on_release: root.turret_select('1')
ToggleButton:
id: turret_pos_2_btn
text: '2'
on_release: root.turret_select('2')
ToggleButton:
id: turret_pos_3_btn
text: '3'
on_release: root.turret_select('3')
ToggleButton:
id: turret_pos_4_btn
text: '4'
on_release: root.turret_select('4')
ZStack:
id: zstack_id
# Z-Stack Settings
<ZStack>:
BoxLayout:
orientation: 'vertical'
padding: '5dp'
spacing: '5dp'
pos_hint: {'x': 0.0, 'y': 0.0}
Label:
text:'Acquire Z Stack'
font_size: '16sp'
size_hint_y: None
height: '30dp'
spacing: '5dp'
color: [51/255, 181/255, 229/255, 1]
BoxLayout:
orientation: 'horizontal'
size_hint_y: None
height: '30dp'
spacing: '5dp'
Label:
font_size: '12sp'
text: 'Step size (um)'
Label:
font_size: '12sp'
text: 'Range'
Label:
font_size: '12sp'
text: '# of Steps'
BoxLayout:
orientation: 'horizontal'
size_hint_y: None
height: '30dp'
spacing: '5dp'
TextInput:
id: zstack_stepsize_id
multiline: False
size_hint_y: None
height: '30dp'
font_size: '12sp'
halign: 'center'
input_filter: 'float'
text: '0'
on_text_validate: root.set_steps()
on_focus: if not self.focus: root.set_steps()
TextInput:
id: zstack_range_id
multiline: False
size_hint_y: None
height: '30dp'
font_size: '12sp'
halign: 'center'
input_filter: 'float'
text: '0'
on_text_validate: root.set_steps()
on_focus: if not self.focus: root.set_steps()
TextInput:
id: zstack_steps_id
multiline: False
size_hint_y: None
height: '30dp'
font_size: '12sp'
halign: 'center'
input_filter: 'int'
text: '0'
disabled: True
Spinner:
id: zstack_spinner
sync_height: True
size_hint_y: None
height: '30dp'
text: 'Z Stack'
font_size: '12dp'
text_autoupdate: True
values: ('Current Position at Top', 'Current Position at Center', 'Current Position at Bottom')
on_text: root.set_position()
# values: ('Focus at Top', 'Focus at Center', 'Focus at Bottom', 'Current Position at Top', 'Current Position at Center', 'Current Position at Bottom')
ToggleButton:
id: zstack_aqr_btn
size_hint_y: None
height: '30dp'
text: 'Acquire'
font_size: '12dp'
on_release: root.aquire_zstack()
Label:
<XYStageControl>:
orientation: 'vertical'
padding: '5dp'
spacing: '5dp'
canvas:
Color:
rgba: 0.1, 0.1, 0.1, 0.7
Rectangle:
size: self.size
pos: self.pos
# HOME and CALIBRATE STAGE
BoxLayout:
orientation: 'horizontal'
size_hint_y: None
height: '30dp'
spacing: '5dp'
# HOME STAGE
Button:
id: home_id
font_size: '12sp'
text: 'Home Stage'
on_release: root.home()
# Button:
# id: center_id
# font_size: '12sp'
# text: 'Center Stage'
# on_release: root.center()
# Button:
# text: 'Calibrate'
# font_size: '12dp'
# on_release: root.calibrate()
# Two Columns for X and Y Directions
BoxLayout:
orientation: 'horizontal'
spacing: '5dp'
size_hint_y: None
height: '170dp'
# X Direction Controls
BoxLayout:
orientation: 'vertical'
spacing: '5dp'
Label:
size_hint_y: None
height: '30dp'
font_size: '12sp'
text: 'X: (mm)'
# Set and Display X Position
TextInput:
id: x_pos_id
multiline: False
size_hint_y: None
height: '30dp'
font_size: '12sp'
halign: 'center'
input_filter: 'float'
text: ''
on_text_validate: root.set_xposition(self.text)
on_focus: if not self.focus: root.set_xposition(self.text)
# Set X Bookmark
Button:
size_hint_y: None
height: '30dp'
font_size: '12sp'
text: 'Set X'
on_release: root.set_xbookmark()
# Goto X Bookmark
Button:
size_hint_y: None
height: '30dp'
font_size: '12sp'
text: 'Go to X'
on_release: root.goto_xbookmark()
# X-Dir Controls
BoxLayout:
orientation: 'horizontal'
spacing: '5dp'
size_hint_y: None
height: '30dp'
Button: # COARSE LEFT
border: 0, 0, 0, 0
size_hint: None, None
size: '30dp', '30dp'
background_normal: './data/icons/LL_normal.png'
background_down: './data/icons/LL_down.png'
on_release: root.coarse_left()
Button: # FINE LEFT
id: slow_up
border: 0, 0, 0, 0
size_hint: None, None
size: '25dp', '30dp'
background_normal: './data/icons/L_normal.png'
background_down: './data/icons/L_down.png'
on_release: root.fine_left()
Button: # FINE RIGHT
id: slow_down
border: 0, 0, 0, 0
size_hint: None, None
size: '25dp', '30dp'
background_normal: './data/icons/R_normal.png'
background_down: './data/icons/R_down.png'
on_release: root.fine_right()
Button: # COARSE RIGHT
id: fast_down
border: 0, 0, 0, 0
size_hint: None, None
size: '30dp', '30dp'
background_normal: './data/icons/RR_normal.png'
background_down: './data/icons/RR_down.png'
on_release: root.coarse_right()
# Y Direction Controls
BoxLayout:
orientation: 'vertical'
spacing: '5dp'
Label:
size_hint_y: None
height: '30dp'
font_size: '12sp'
text: 'Y: (mm)'
# Set and Display Y Position
TextInput:
id: y_pos_id
multiline: False
size_hint_y: None
height: '30dp'
font_size: '12sp'
halign: 'center'
input_filter: 'float'
text: ''
on_text_validate: root.set_yposition(self.text)
on_focus: if not self.focus: root.set_yposition(self.text)
# Set Y Bookmark
Button:
size_hint_y: None
height: '30dp'
font_size: '12sp'
text: 'Set Y'
on_release: root.set_ybookmark()
# Goto Y Bookmark
Button:
size_hint_y: None
height: '30dp'
font_size: '12sp'
text: 'Go to Y'
on_release: root.goto_ybookmark()
# Y-Dir Controls
BoxLayout:
orientation: 'horizontal'
spacing: '5dp'
size_hint_y: None
height: '30dp'
Button: # COARSE FORWARD
id: fast_down
border: 0, 0, 0, 0
size_hint: None, None
size: '30dp', ' 30dp'
background_normal: './data/icons/DD_normal.png'
background_down: './data/icons/DD_down.png'
on_release: root.coarse_back()
Button: # FINE FORWARD
border: 0, 0, 0, 0
size_hint: None, None
size: '25dp', '30dp'
background_normal: './data/icons/D_normal.png'
background_down: './data/icons/D_down.png'
on_release: root.fine_back()
Button: # FINE BACK
border: 0, 0, 0, 0
size_hint: None, None
size: '25dp', '30dp'
background_normal: './data/icons/U_normal.png'
background_down: './data/icons/U_down.png'
on_release: root.fine_fwd()
Button: # COARSE BACK
border: 0, 0, 0, 0
size_hint: None, None
size: '30dp', '30dp'
background_normal: './data/icons/UU_normal.png'
background_down: './data/icons/UU_down.png'
on_release: root.coarse_fwd()
# # Select Labware
# Spinner:
# id: labware_spinner
# sync_height: True
# text: 'New'
# font_size: '12dp'
# size_hint_y: None
# height: '30dp'
# text_autoupdate: True
# # on_text: root.select_labware()
# Stage Display
FloatLayout:
padding: '5dp'
size_hint_y: None
height: self.width * 2 / 3
Stage:
id: stage_control_id
pos_hint:{'center_x':0.5, 'center_y':0.5}
# Fill Space
Label:
# ProtocolSettings - Settings for Labware within ImageSettings
# ------------------------------------------
<ProtocolSettings>:
BoxLayout:
padding: '5dp'
spacing: '5dp'
orientation: 'vertical'
pos_hint: {'x': 0.0, 'y': 0.0}
canvas:
Color:
rgba: 0.1, 0.1, 0.1, 0.7
Rectangle:
size: self.size
pos: self.pos
# Time Settings
Label:
text: 'Time Settings'
font_size: '16sp'
size_hint_y: None
height: '30dp'
spacing: '5dp'
color: [51/255, 181/255, 229/255, 1]
# Capture Period
BoxLayout:
orientation: 'horizontal'
size_hint_y: None
height: '30dp'
Label:
text: 'Interval'
size_hint_x: None
width: '95dp'
font_size: '12sp'
TextInput:
id: capture_period
multiline: False
size_hint_y: None
height: '30dp'
font_size: '12sp'
padding: ['4dp', (self.height-self.line_height)/2]
halign: 'right'
input_filter: 'float'
text: format(5, '.3g')
on_text_validate: root.update_period()
on_focus: if not self.focus: root.update_period()
Label:
text: 'minutes'
size_hint_x: None
width: '95dp'
font_size: '12sp'
# Capture Duration
BoxLayout:
orientation: 'horizontal'
size_hint_y: None
height: '30dp'
Label:
text: 'Duration'
size_hint_x: None
width: '95dp'
font_size: '12sp'
TextInput:
id: capture_dur
multiline: False
size_hint_y: None
height: '30dp'
font_size: '12sp'
padding: ['4dp', (self.height-self.line_height)/2]
halign: 'right'
input_filter: 'float'
text: format(48, '.3g')
on_text_validate: root.update_duration()
on_focus: if not self.focus: root.update_duration()
Label:
text: 'hours'
size_hint_x: None
width: '95dp'
font_size: '12sp'
# Protocol Selection
Label:
text: 'Create New Scan'
font_size: '16sp'
size_hint_y: None
height: '30dp'
spacing: '5dp'
color: [51/255, 181/255, 229/255, 1]
# # Select Labware Box
# BoxLayout:
# orientation: 'horizontal'
# size_hint_y: None
# height: '30dp'
# spacing: '5dp'
# Select Labware
Spinner:
id: labware_spinner
sync_height: True
visible: True
text: 'New'
font_size: '12dp'
size_hint_y: None
height: '30dp'
text_autoupdate: True
on_text: root.select_labware()
# Load and Save Protocol
BoxLayout:
orientation: 'horizontal'
size_hint_y: None
height: '30dp'
spacing: '5dp'
Button:
text: 'New'
size_hint_y: None
height: '30dp'
font_size: '12sp'
on_release: root.new_protocol()
FileChooseBTN:
text: 'Load'
size_hint_y: None
height: '30dp'
font_size: '12sp'
on_release: self.choose('load_protocol')
Button:
text: 'Save'
size_hint_y: None
height: '30dp'
font_size: '12sp'
disabled: False
on_release: root.save_protocol()
FileSaveBTN:
text: 'Save As'
size_hint_y: None
height: '30dp'
font_size: '12sp'
on_release: self.choose('saveas_protocol')
# Stage Display
FloatLayout:
padding: '5dp'
size_hint_y: None
height: '128dp'
height: self.width * 2 / 3
Stage:
id: stage_widget_id
pos_hint:{'center_x':0.5, 'center_y':0.5}
# Protocol Name
BoxLayout:
orientation: 'horizontal'
size_hint_y: None
height: '30dp'
spacing: '5dp'
Label:
text: 'Protocol'
size_hint_x: None
width: '75dp'
font_size: '12sp'
TextInput:
id: protocol_filename
text: ''
size_hint_y: None
height: '30dp'
font_size: '12sp'
halign: 'center'
multiline: False
disabled: True
hint_text: 'Protocol Filename'
# Step Name
BoxLayout:
orientation: 'horizontal'
size_hint_y: None
height: '30dp'
spacing: '5dp'
Label:
text: 'Step Name'
size_hint_x: None
width: '75dp'
font_size: '12sp'
TextInput:
id: step_name_input
text: ''
size_hint_y: None
height: '30dp'
font_size: '12sp'
halign: 'center'
multiline: False
hint_text: 'Step Name'
BoxLayout:
orientation: 'horizontal'
size_hint_y: None
height: '30dp'
spacing: '5dp'
Label:
text: 'Step'
size_hint_x: None
width: '75dp'
font_size: '12sp'
Button:
id: prev_step_btn
border: 0, 0, 0, 0
size_hint: None, None
size: '30dp', '30dp'
pos_hint: {'center_x': 0.35, 'center_y': 0.5}
background_normal: './data/icons/L_normal.png'
background_down: './data/icons/L_down.png'
on_release: root.prev_step()
TextInput:
id: step_number_input
text: '1'
size_hint_y: None
height: '30dp'
font_size: '12sp'
halign: 'center'
multiline: False
input_filter: 'int'
on_text_validate: root.go_to_step()
on_focus: if not self.focus: root.go_to_step()
Label:
text: 'of'
size_hint_x: None
width: '20dp'
size_hint_y: None
height: '30dp'
font_size: '12sp'
TextInput:
id: step_total_input
text: '1'
size_hint_y: None
height: '30dp'
font_size: '12sp'