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Setting up #42

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3 tasks done
Selphie14100 opened this issue Mar 20, 2023 · 13 comments
Closed
3 tasks done

Setting up #42

Selphie14100 opened this issue Mar 20, 2023 · 13 comments
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bug Something isn't working

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@Selphie14100
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Contribution guidelines

  • I've read the contribution guidelines.
  • The documentation does not mention anything about my problem.
  • There are no open or closed issues that are related to my problem.

Description

I cant install ATOM-ml and use it in a jupyter notebook

It is listed in pip list in my environment. However I can't access it nor is it listed in a jupyter notebook in the same environment,

Expected behaviour

I expect
import atom
to work

Actual behaviour

Tried installing from in Jupyter

import sys
!{sys.executable} -m pip install atom-ml[full]

import atom

Output below

Collecting atom-ml[full]
Using cached atom_ml-5.1.1-py3-none-any.whl (222 kB)
Collecting numpy>=1.23.5
Using cached numpy-1.24.2-cp39-cp39-win_amd64.whl (14.9 MB)
Collecting dill>=0.3.6
Using cached dill-0.3.6-py3-none-any.whl (110 kB)
Requirement already satisfied: joblib>=1.1.0 in c:\users\user\anaconda3\lib\site-packages (from atom-ml[full]) (1.2.0)
Requirement already satisfied: shap>=0.41.0 in c:\users\user\anaconda3\lib\site-packages (from atom-ml[full]) (0.41.0)
Collecting scikit-learn>=1.2.1
Using cached scikit_learn-1.2.2-cp39-cp39-win_amd64.whl (8.4 MB)
Collecting matplotlib>=3.6.3
Using cached matplotlib-3.7.1-cp39-cp39-win_amd64.whl (7.6 MB)
Collecting ray[serve]>=2.3.0
Using cached ray-2.3.0-cp39-cp39-win_amd64.whl (21.7 MB)
Collecting plotly>=5.13.1
Using cached plotly-5.13.1-py2.py3-none-any.whl (15.2 MB)
Requirement already satisfied: imbalanced-learn>=0.10.1 in c:\users\user\anaconda3\lib\site-packages (from atom-ml[full]) (0.10.1)
Collecting modin[ray]>=0.18.1
Using cached modin-0.19.0-py3-none-any.whl (1.0 MB)
Collecting zoofs>=0.1.26
Using cached zoofs-0.1.26-py3-none-any.whl
Collecting scikit-learn-intelex>=2023.0.1
Using cached scikit_learn_intelex-2023.0.1-py39-none-win_amd64.whl (89 kB)
Collecting pandas>=1.5.3
Using cached pandas-1.5.3-cp39-cp39-win_amd64.whl (10.9 MB)
Collecting mlflow>=2.2.0
Using cached mlflow-2.2.2-py3-none-any.whl (17.6 MB)
Requirement already satisfied: optuna>=3.1.0 in c:\users\user\anaconda3\lib\site-packages (from atom-ml[full]) (3.1.0)
Collecting dagshub<=0.2.10
Using cached dagshub-0.2.10-py3-none-any.whl (46 kB)
Collecting featuretools>=1.23.0
Using cached featuretools-1.23.0-py3-none-any.whl (555 kB)
Collecting nltk>=3.8.1
Using cached nltk-3.8.1-py3-none-any.whl (1.5 MB)
Collecting gplearn>=0.4.2
Using cached gplearn-0.4.2-py3-none-any.whl (25 kB)
Collecting scipy>=1.9.3
Using cached scipy-1.10.1-cp39-cp39-win_amd64.whl (42.5 MB)
Requirement already satisfied: category-encoders>=2.5.1 in c:\users\user\anaconda3\lib\site-packages (from atom-ml[full]) (2.6.0)
Collecting ydata-profiling>=4.1.0
Using cached ydata_profiling-4.1.1-py2.py3-none-any.whl (344 kB)
Collecting gradio>=3.19.1
Using cached gradio-3.22.1-py3-none-any.whl (15.8 MB)
Requirement already satisfied: lightgbm>=3.3.5 in c:\users\user\anaconda3\lib\site-packages (from atom-ml[full]) (3.3.5)
Collecting evalml>=0.68.0
Using cached evalml-0.71.0-py3-none-any.whl (6.5 MB)
Requirement already satisfied: catboost>=1.1.1 in c:\users\user\anaconda3\lib\site-packages (from atom-ml[full]) (1.1.1)
Collecting xgboost>=1.7.4
Using cached xgboost-1.7.4-py3-none-win_amd64.whl (89.1 MB)
Requirement already satisfied: schemdraw>=0.15 in c:\users\user\anaconda3\lib\site-packages (from atom-ml[full]) (0.15)
Requirement already satisfied: wordcloud>=1.8.2 in c:\users\user\anaconda3\lib\site-packages (from atom-ml[full]) (1.8.2.2)
Collecting explainerdashboard>=0.4.2
Using cached explainerdashboard-0.4.2.1-py3-none-any.whl (286 kB)
Requirement already satisfied: six in c:\users\user\anaconda3\lib\site-packages (from catboost>=1.1.1->atom-ml[full]) (1.16.0)
Requirement already satisfied: graphviz in c:\users\user\anaconda3\lib\site-packages (from catboost>=1.1.1->atom-ml[full]) (0.20.1)
Requirement already satisfied: statsmodels>=0.9.0 in c:\users\user\anaconda3\lib\site-packages (from category-encoders>=2.5.1->atom-ml[full]) (0.13.2)
Requirement already satisfied: patsy>=0.5.1 in c:\users\user\anaconda3\lib\site-packages (from category-encoders>=2.5.1->atom-ml[full]) (0.5.2)
Collecting GitPython>=3.1.29
Using cached GitPython-3.1.31-py3-none-any.whl (184 kB)
Collecting httpx==0.22.0
Using cached httpx-0.22.0-py3-none-any.whl (84 kB)
Collecting fusepy>=3
Using cached fusepy-3.0.1-py3-none-any.whl
Requirement already satisfied: PyYAML>=5 in c:\users\user\anaconda3\lib\site-packages (from dagshub<=0.2.10->atom-ml[full]) (6.0)
Requirement already satisfied: appdirs>=1.4.4 in c:\users\user\anaconda3\lib\site-packages (from dagshub<=0.2.10->atom-ml[full]) (1.4.4)
Requirement already satisfied: click>=8.0.4 in c:\users\user\anaconda3\lib\site-packages (from dagshub<=0.2.10->atom-ml[full]) (8.0.4)
Collecting rfc3986[idna2008]<2,>=1.3
Using cached rfc3986-1.5.0-py2.py3-none-any.whl (31 kB)
Requirement already satisfied: charset-normalizer in c:\users\user\anaconda3\lib\site-packages (from httpx==0.22.0->dagshub<=0.2.10->atom-ml[full]) (2.0.4)
Collecting httpcore<0.15.0,>=0.14.5
Using cached httpcore-0.14.7-py3-none-any.whl (68 kB)
Requirement already satisfied: sniffio in c:\users\user\anaconda3\lib\site-packages (from httpx==0.22.0->dagshub<=0.2.10->atom-ml[full]) (1.2.0)
Requirement already satisfied: certifi in c:\users\user\anaconda3\lib\site-packages (from httpx==0.22.0->dagshub<=0.2.10->atom-ml[full]) (2022.9.14)
Collecting texttable>=1.6.2
Using cached texttable-1.6.7-py2.py3-none-any.whl (10 kB)
Requirement already satisfied: black[jupyter]>=22.3.0 in c:\users\user\anaconda3\lib\site-packages (from evalml>=0.68.0->atom-ml[full]) (22.6.0)
Requirement already satisfied: scikit-optimize>=0.9.0 in c:\users\user\anaconda3\lib\site-packages (from evalml>=0.68.0->atom-ml[full]) (0.9.0)
Requirement already satisfied: pmdarima>=1.8.5 in c:\users\user\anaconda3\lib\site-packages (from evalml>=0.68.0->atom-ml[full]) (2.0.3)
Requirement already satisfied: pyzmq>=20.0.0 in c:\users\user\anaconda3\lib\site-packages (from evalml>=0.68.0->atom-ml[full]) (23.2.0)
Requirement already satisfied: sktime>=0.15.0 in c:\users\user\anaconda3\lib\site-packages (from evalml>=0.68.0->atom-ml[full]) (0.16.1)
Collecting category-encoders>=2.5.1
Using cached category_encoders-2.5.1.post0-py2.py3-none-any.whl (72 kB)
Collecting lime>=0.2.0.1
Using cached lime-0.2.0.1-py3-none-any.whl
Requirement already satisfied: networkx>=2.6 in c:\users\user\anaconda3\lib\site-packages (from evalml>=0.68.0->atom-ml[full]) (2.8.4)
Collecting nlp-primitives>=2.9.0
Using cached nlp_primitives-2.10.0-py3-none-any.whl (44.7 MB)
Collecting packaging>=23.0
Using cached packaging-23.0-py3-none-any.whl (42 kB)
Requirement already satisfied: kaleido>=0.1.0 in c:\users\user\anaconda3\lib\site-packages (from evalml>=0.68.0->atom-ml[full]) (0.2.1)
Collecting woodwork>=0.22.0
Using cached woodwork-0.22.0-py3-none-any.whl (232 kB)
Collecting holidays<0.21,>=0.13
Using cached holidays-0.20-py3-none-any.whl (226 kB)
Requirement already satisfied: dask!=2022.10.1,>=2022.2.0 in c:\users\user\anaconda3\lib\site-packages (from evalml>=0.68.0->atom-ml[full]) (2022.7.0)
Requirement already satisfied: ipywidgets>=7.5 in c:\users\user\anaconda3\lib\site-packages (from evalml>=0.68.0->atom-ml[full]) (7.6.5)
Collecting vowpalwabbit>=8.11.0
Downloading vowpalwabbit-9.8.0-cp39-cp39-win_amd64.whl (4.1 MB)
---------------------------------------- 4.1/4.1 MB 1.5 MB/s eta 0:00:00
Requirement already satisfied: cloudpickle>=1.5.0 in c:\users\user\anaconda3\lib\site-packages (from evalml>=0.68.0->atom-ml[full]) (2.0.0)
Requirement already satisfied: seaborn>=0.11.1 in c:\users\user\anaconda3\lib\site-packages (from evalml>=0.68.0->atom-ml[full]) (0.11.2)
Requirement already satisfied: tomli>=2.0.1 in c:\users\user\anaconda3\lib\site-packages (from evalml>=0.68.0->atom-ml[full]) (2.0.1)
Requirement already satisfied: colorama>=0.4.4 in c:\users\user\anaconda3\lib\site-packages (from evalml>=0.68.0->atom-ml[full]) (0.4.6)
Collecting dash-auth
Using cached dash_auth-2.0.0-py3-none-any.whl (3.4 kB)
Collecting dash-bootstrap-components>=1
Using cached dash_bootstrap_components-1.4.1-py3-none-any.whl (220 kB)
Collecting oyaml
Using cached oyaml-1.0-py2.py3-none-any.whl (3.0 kB)
Requirement already satisfied: jupyter-dash>=0.4.1 in c:\users\user\anaconda3\lib\site-packages (from explainerdashboard>=0.4.2->atom-ml[full]) (0.4.2)
Collecting flask-simplelogin
Using cached flask_simplelogin-0.1.1-py3-none-any.whl (7.2 kB)
Requirement already satisfied: dash>=2.3.1 in c:\users\user\anaconda3\lib\site-packages (from explainerdashboard>=0.4.2->atom-ml[full]) (2.9.1)
Collecting waitress
Using cached waitress-2.1.2-py3-none-any.whl (57 kB)
Requirement already satisfied: dtreeviz>=2.1 in c:\users\user\anaconda3\lib\site-packages (from explainerdashboard>=0.4.2->atom-ml[full]) (2.2.0)
Requirement already satisfied: psutil>=5.6.6 in c:\users\user\anaconda3\lib\site-packages (from featuretools>=1.23.0->atom-ml[full]) (5.9.0)
Requirement already satisfied: distributed!=2022.10.1,>=2022.2.0 in c:\users\user\anaconda3\lib\site-packages (from featuretools>=1.23.0->atom-ml[full]) (2022.7.0)
Requirement already satisfied: tqdm>=4.32.0 in c:\users\user\anaconda3\lib\site-packages (from featuretools>=1.23.0->atom-ml[full]) (4.64.1)
Requirement already satisfied: pillow in c:\users\user\anaconda3\lib\site-packages (from gradio>=3.19.1->atom-ml[full]) (9.2.0)
Collecting python-multipart
Using cached python_multipart-0.0.6-py3-none-any.whl (45 kB)
Collecting altair>=4.2.0
Using cached altair-4.2.2-py3-none-any.whl (813 kB)
Collecting websockets>=10.0
Using cached websockets-10.4-cp39-cp39-win_amd64.whl (101 kB)
Collecting pydub
Using cached pydub-0.25.1-py2.py3-none-any.whl (32 kB)
Requirement already satisfied: requests in c:\users\user\anaconda3\lib\site-packages (from gradio>=3.19.1->atom-ml[full]) (2.28.1)
Requirement already satisfied: orjson in c:\users\user\anaconda3\lib\site-packages (from gradio>=3.19.1->atom-ml[full]) (3.8.7)
Collecting uvicorn
Using cached uvicorn-0.21.1-py3-none-any.whl (57 kB)
Collecting fastapi
Using cached fastapi-0.95.0-py3-none-any.whl (57 kB)
Collecting aiofiles
Using cached aiofiles-23.1.0-py3-none-any.whl (14 kB)
Requirement already satisfied: fsspec in c:\users\user\anaconda3\lib\site-packages (from gradio>=3.19.1->atom-ml[full]) (2022.7.1)
Requirement already satisfied: typing-extensions in c:\users\user\anaconda3\lib\site-packages (from gradio>=3.19.1->atom-ml[full]) (4.3.0)
Collecting pydantic
Using cached pydantic-1.10.6-cp39-cp39-win_amd64.whl (2.2 MB)
Requirement already satisfied: markupsafe in c:\users\user\anaconda3\lib\site-packages (from gradio>=3.19.1->atom-ml[full]) (2.0.1)
Collecting markdown-it-py[linkify]>=2.0.0
Using cached markdown_it_py-2.2.0-py3-none-any.whl (84 kB)
Collecting huggingface-hub>=0.13.0
Downloading huggingface_hub-0.13.3-py3-none-any.whl (199 kB)
-------------------------------------- 199.8/199.8 kB 2.0 MB/s eta 0:00:00
Collecting ffmpy
Using cached ffmpy-0.3.0-py3-none-any.whl
Collecting mdit-py-plugins<=0.3.3
Using cached mdit_py_plugins-0.3.3-py3-none-any.whl (50 kB)
Requirement already satisfied: jinja2 in c:\users\user\anaconda3\lib\site-packages (from gradio>=3.19.1->atom-ml[full]) (2.11.3)
Collecting aiohttp
Using cached aiohttp-3.8.4-cp39-cp39-win_amd64.whl (323 kB)
Requirement already satisfied: threadpoolctl>=2.0.0 in c:\users\user\anaconda3\lib\site-packages (from imbalanced-learn>=0.10.1->atom-ml[full]) (2.2.0)
Requirement already satisfied: wheel in c:\users\user\anaconda3\lib\site-packages (from lightgbm>=3.3.5->atom-ml[full]) (0.38.4)
Requirement already satisfied: kiwisolver>=1.0.1 in c:\users\user\anaconda3\lib\site-packages (from matplotlib>=3.6.3->atom-ml[full]) (1.4.2)
Requirement already satisfied: cycler>=0.10 in c:\users\user\anaconda3\lib\site-packages (from matplotlib>=3.6.3->atom-ml[full]) (0.11.0)
Requirement already satisfied: fonttools>=4.22.0 in c:\users\user\anaconda3\lib\site-packages (from matplotlib>=3.6.3->atom-ml[full]) (4.25.0)
Requirement already satisfied: pyparsing>=2.3.1 in c:\users\user\anaconda3\lib\site-packages (from matplotlib>=3.6.3->atom-ml[full]) (3.0.9)
Collecting contourpy>=1.0.1
Using cached contourpy-1.0.7-cp39-cp39-win_amd64.whl (160 kB)
Requirement already satisfied: python-dateutil>=2.7 in c:\users\user\anaconda3\lib\site-packages (from matplotlib>=3.6.3->atom-ml[full]) (2.8.2)
Requirement already satisfied: importlib-resources>=3.2.0 in c:\users\user\anaconda3\lib\site-packages (from matplotlib>=3.6.3->atom-ml[full]) (5.10.2)
Requirement already satisfied: protobuf<5,>=3.12.0 in c:\users\user\anaconda3\lib\site-packages (from mlflow>=2.2.0->atom-ml[full]) (3.19.6)
Requirement already satisfied: Flask<3 in c:\users\user\anaconda3\lib\site-packages (from mlflow>=2.2.0->atom-ml[full]) (1.1.2)
Collecting sqlparse<1,>=0.4.0
Using cached sqlparse-0.4.3-py3-none-any.whl (42 kB)
Collecting pyarrow<12,>=4.0.0
Using cached pyarrow-11.0.0-cp39-cp39-win_amd64.whl (20.6 MB)
Requirement already satisfied: markdown<4,>=3.3 in c:\users\user\anaconda3\lib\site-packages (from mlflow>=2.2.0->atom-ml[full]) (3.3.4)
Requirement already satisfied: pytz<2023 in c:\users\user\anaconda3\lib\site-packages (from mlflow>=2.2.0->atom-ml[full]) (2022.1)
Collecting databricks-cli<1,>=0.8.7
Using cached databricks_cli-0.17.5-py3-none-any.whl
Requirement already satisfied: entrypoints<1 in c:\users\user\anaconda3\lib\site-packages (from mlflow>=2.2.0->atom-ml[full]) (0.4)
Collecting querystring-parser<2
Using cached querystring_parser-1.2.4-py2.py3-none-any.whl (7.9 kB)
Requirement already satisfied: sqlalchemy<3,>=1.4.0 in c:\users\user\anaconda3\lib\site-packages (from mlflow>=2.2.0->atom-ml[full]) (1.4.39)
Requirement already satisfied: importlib-metadata!=4.7.0,<7,>=3.7.0 in c:\users\user\anaconda3\lib\site-packages (from mlflow>=2.2.0->atom-ml[full]) (6.1.0)
Collecting docker<7,>=4.0.0
Using cached docker-6.0.1-py3-none-any.whl (147 kB)
Requirement already satisfied: alembic<2 in c:\users\user\anaconda3\lib\site-packages (from mlflow>=2.2.0->atom-ml[full]) (1.9.4)
Collecting jinja2
Using cached Jinja2-3.1.2-py3-none-any.whl (133 kB)
Requirement already satisfied: regex>=2021.8.3 in c:\users\user\anaconda3\lib\site-packages (from nltk>=3.8.1->atom-ml[full]) (2022.7.9)
Requirement already satisfied: colorlog in c:\users\user\anaconda3\lib\site-packages (from optuna>=3.1.0->atom-ml[full]) (6.7.0)
Requirement already satisfied: cmaes>=0.9.1 in c:\users\user\anaconda3\lib\site-packages (from optuna>=3.1.0->atom-ml[full]) (0.9.1)
Requirement already satisfied: tenacity>=6.2.0 in c:\users\user\anaconda3\lib\site-packages (from plotly>=5.13.1->atom-ml[full]) (8.0.1)
Requirement already satisfied: msgpack<2.0.0,>=1.0.0 in c:\users\user\anaconda3\lib\site-packages (from ray[serve]>=2.3.0->atom-ml[full]) (1.0.3)
Collecting virtualenv>=20.0.24
Using cached virtualenv-20.21.0-py3-none-any.whl (8.7 MB)
Requirement already satisfied: filelock in c:\users\user\anaconda3\lib\site-packages (from ray[serve]>=2.3.0->atom-ml[full]) (3.6.0)
Requirement already satisfied: grpcio>=1.32.0 in c:\users\user\anaconda3\lib\site-packages (from ray[serve]>=2.3.0->atom-ml[full]) (1.51.3)
Requirement already satisfied: jsonschema in c:\users\user\anaconda3\lib\site-packages (from ray[serve]>=2.3.0->atom-ml[full]) (4.16.0)
Collecting frozenlist
Using cached frozenlist-1.3.3-cp39-cp39-win_amd64.whl (34 kB)
Collecting aiosignal
Using cached aiosignal-1.3.1-py3-none-any.whl (7.6 kB)
Requirement already satisfied: attrs in c:\users\user\anaconda3\lib\site-packages (from ray[serve]>=2.3.0->atom-ml[full]) (21.4.0)
Requirement already satisfied: smart-open in c:\users\user\anaconda3\lib\site-packages (from ray[serve]>=2.3.0->atom-ml[full]) (5.2.1)
Collecting gpustat>=1.0.0
Using cached gpustat-1.0.0-py3-none-any.whl
Requirement already satisfied: prometheus-client>=0.7.1 in c:\users\user\anaconda3\lib\site-packages (from ray[serve]>=2.3.0->atom-ml[full]) (0.14.1)
Collecting opencensus
Using cached opencensus-0.11.2-py2.py3-none-any.whl (128 kB)
Collecting aiorwlock
Using cached aiorwlock-1.3.0-py3-none-any.whl (10.0 kB)
Collecting starlette
Using cached starlette-0.26.1-py3-none-any.whl (66 kB)
Collecting py-spy>=0.2.0
Using cached py_spy-0.3.14-py2.py3-none-win_amd64.whl (1.4 MB)
Collecting aiohttp-cors
Using cached aiohttp_cors-0.7.0-py3-none-any.whl (27 kB)
Collecting colorful
Using cached colorful-0.5.5-py2.py3-none-any.whl (201 kB)
Collecting daal4py==2023.0.1
Using cached daal4py-2023.0.1-py39-none-win_amd64.whl (10.6 MB)
Collecting daal==2023.0.1
Using cached daal-2023.0.1-py2.py3-none-win_amd64.whl (63.5 MB)
Collecting tbb==2021.*
Using cached tbb-2021.7.1-py3-none-win_amd64.whl (278 kB)
Requirement already satisfied: slicer==0.0.7 in c:\users\user\anaconda3\lib\site-packages (from shap>=0.41.0->atom-ml[full]) (0.0.7)
Requirement already satisfied: numba in c:\users\user\anaconda3\lib\site-packages (from shap>=0.41.0->atom-ml[full]) (0.55.1)
Collecting htmlmin==0.1.12
Using cached htmlmin-0.1.12-py3-none-any.whl
Collecting phik<0.13,>=0.11.1
Using cached phik-0.12.3-cp39-cp39-win_amd64.whl (663 kB)
Collecting scipy>=1.9.3
Using cached scipy-1.9.3-cp39-cp39-win_amd64.whl (40.2 MB)
Collecting imagehash==4.3.1
Using cached ImageHash-4.3.1-py2.py3-none-any.whl (296 kB)
Collecting matplotlib>=3.6.3
Downloading matplotlib-3.6.3-cp39-cp39-win_amd64.whl (7.2 MB)
---------------------------------------- 7.2/7.2 MB 2.2 MB/s eta 0:00:00
Collecting numpy>=1.23.5
Using cached numpy-1.23.5-cp39-cp39-win_amd64.whl (14.7 MB)
Collecting visions[type_image_path]==0.7.5
Using cached visions-0.7.5-py3-none-any.whl (102 kB)
Collecting multimethod<1.10,>=1.4
Using cached multimethod-1.9.1-py3-none-any.whl (10 kB)
Collecting typeguard<2.14,>=2.13.2
Using cached typeguard-2.13.3-py3-none-any.whl (17 kB)
Requirement already satisfied: PyWavelets in c:\users\user\anaconda3\lib\site-packages (from imagehash==4.3.1->ydata-profiling>=4.1.0->atom-ml[full]) (1.3.0)
Collecting tangled-up-in-unicode>=0.0.4
Using cached tangled_up_in_unicode-0.2.0-py3-none-any.whl (4.7 MB)
Collecting async-timeout<5.0,>=4.0.0a3
Using cached async_timeout-4.0.2-py3-none-any.whl (5.8 kB)
Collecting yarl<2.0,>=1.0
Using cached yarl-1.8.2-cp39-cp39-win_amd64.whl (56 kB)
Collecting multidict<7.0,>=4.5
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Requirement already satisfied: webencodings in c:\users\user\anaconda3\lib\site-packages (from bleach->nbconvert>=5->notebook>=4.4.1->widgetsnbextension~=3.5.0->ipywidgets>=7.5->evalml>=0.68.0->atom-ml[full]) (0.5.1)
Requirement already satisfied: pycparser in c:\users\user\anaconda3\lib\site-packages (from cffi>=1.0.1->argon2-cffi-bindings->argon2-cffi->notebook>=4.4.1->widgetsnbextension~=3.5.0->ipywidgets>=7.5->evalml>=0.68.0->atom-ml[full]) (2.21)
Installing collected packages: texttable, tbb, rfc3986, pywin32, PyMeeus, pydub, py-spy, opencensus-context, nvidia-ml-py, korean-lunar-calendar, htmlmin, fusepy, ffmpy, distlib, ansicon, WTForms, websockets, waitress, vowpalwabbit, virtualenv, uc-micro-py, typeguard, tokenize-rt, tangled-up-in-unicode, sqlparse, smmap, querystring-parser, python-multipart, pydantic, plotly, packaging, oyaml, numpy, multimethod, multidict, mdurl, llvmlite, jinxed, jinja2, hijri-converter, h11, googleapis-common-protos, frozenlist, dill, daal, convertdate, colorful, async-timeout, aiorwlock, aiofiles, yarl, uvicorn, starlette, scipy, pyarrow, pandas, numba, nltk, markdown-it-py, linkify-it-py, huggingface-hub, httpcore, holidays, gitdb, docker, databricks-cli, daal4py, contourpy, blessed, aiosignal, zoofs, xgboost, visions, scikit-learn, ray, modin, mdit-py-plugins, matplotlib, imagehash, httpx, gpustat, google-api-core, GitPython, Flask-WTF, fastapi, altair, aiohttp, woodwork, scikit-learn-intelex, phik, opencensus, lime, gradio, gplearn, flask-simplelogin, dash-bootstrap-components, dash-auth, dagshub, category-encoders, aiohttp-cors, ydata-profiling, mlflow, explainerdashboard, featuretools, nlp-primitives, atom-ml, evalml
Attempting uninstall: tbb
Found existing installation: TBB 0.2

ERROR: Cannot uninstall 'TBB'. It is a distutils installed project and thus we cannot accurately determine which files belong to it which would lead to only a partial uninstall.


ModuleNotFoundError Traceback (most recent call last)
~\AppData\Local\Temp\ipykernel_9756\2535248663.py in
2 get_ipython().system('{sys.executable} -m pip install atom-ml[full]')
3
----> 4 import atom

ModuleNotFoundError: No module named 'atom'

Steps to reproduce

No response

Python and package version

  • Python: import sys; sys.version 3.10.9
  • ATOM: import atom; atom.__version__ 5.1.1
@Selphie14100 Selphie14100 added the bug Something isn't working label Mar 20, 2023
@tvdboom
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tvdboom commented Mar 21, 2023

What OS are you on? Is it macOS? Also, can you check in your site-packages directory if the atom directory is present? Also, how can you run import atom; atom.__version__ 5.1.1 if you weren't able to import it in the first place?

@Selphie14100
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using Win 10. It is in site-packages directory.
If I use pip to show it I get
(basicai) C:\Users\User>pip show atom_ml
WARNING: Ignoring invalid distribution -ttpx (c:\users\user\anaconda3\envs\basicai\lib\site-packages)
Name: atom-ml
Version: 5.1.1
Summary: A Python package for fast exploration of machine learning pipelines
Home-page:
Author:
Author-email: Mavs m.524687@gmail.com
License:
Location: c:\users\user\anaconda3\envs\basicai\lib\site-packages

I am trying to use it in a jupyter notebook

@tvdboom
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tvdboom commented Mar 22, 2023

Ok, so it is installed but for some reason it can not be imported. Maybe your pythonpath is wrong? what happens when you copy the atom-ml directory from site-packages to your current working directory?

@Selphie14100
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I get this

ModuleNotFoundError Traceback (most recent call last)
~\AppData\Local\Temp\ipykernel_16608\3307495225.py in
----> 1 import atom

~\atom_init_.py in
8 """
9
---> 10 from atom.api import ATOMClassifier, ATOMModel, ATOMRegressor
11 from atom.utils import version

~\atom\api.py in
14 from sklearn.base import clone
15
---> 16 from atom.atom import ATOM
17 from atom.basetransformer import BaseTransformer
18 from atom.utils import INT, SCALAR, SEQUENCE, TARGET, Predictor

~\atom\atom.py in
22 from sklearn.utils.metaestimators import available_if
23
---> 24 from atom.baserunner import BaseRunner
25 from atom.basetransformer import BaseTransformer
26 from atom.branch import Branch

~\atom\baserunner.py in
21 from sklearn.utils.metaestimators import available_if
22
---> 23 from atom.basemodel import BaseModel
24 from atom.basetracker import BaseTracker
25 from atom.basetransformer import BaseTransformer

~\atom\basemodel.py in
21
22 import dill as pickle
---> 23 import mlflow
24 import numpy as np
25 import pandas as pd

ModuleNotFoundError: No module named 'mlflow'

@tvdboom
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tvdboom commented Mar 22, 2023

oke, in this case you are missing some dependencies. are you sure you installed atom in the same environment your kernel is on? could you try and reinstall atom again and see if the output changed? or just install mlflow separately.

@Selphie14100
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I'm new at this but as I can install other packages happily and I'm getting errors with this one is the problem more likely to be with the package in some way? I'm not keen on putting directories and files all over the place. I'm trying to keep it tidy in virtual environments.

@Selphie14100
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I have tried installing it in another virtual environment by itself and got
~\atom\utils.py in
28
29 import mlflow
---> 30 import modin.pandas as md
31 import numpy as np
32 import pandas as pd

ModuleNotFoundError: No module named 'modin'

@tvdboom
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tvdboom commented Mar 22, 2023

are you using pip or conda? In the new env the error is clear. you are missing the modin package, which is a dependency of atom. The question is why isn't it being installed with the package. I tried it myself in a new virtual env and it works fine, so I am not sure it's the package

@Selphie14100
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I've been using pip rather than conda

@Selphie14100
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Tried with conda
(basicai) C:\Users\User>conda config --set channel_priority strict

(basicai) C:\Users\User>conda install atom-ml
Collecting package metadata (current_repodata.json): done
Solving environment: failed with initial frozen solve. Retrying with flexible solve.
Collecting package metadata (repodata.json): done
Solving environment: failed with initial frozen solve. Retrying with flexible solve.

PackagesNotFoundError: The following packages are not available from current channels:

  • atom-ml

Current channels:

To search for alternate channels that may provide the conda package you're
looking for, navigate to

https://anaconda.org

and use the search bar at the top of the page.

@tvdboom
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tvdboom commented Mar 23, 2023

you need to use conda install -c conda-forge atom-ml. But still, it should work with pip. It looks to me that the issue is related to environments. I think you didn't install atom in the same env as your kernel is running. That's why, when you import atom from the directory you copy pasted, it misses some dependencies.

@Selphie14100
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Agreed there is something environmental going on.. However I've got it running on Google Colab so all Good!!! Thank you for your help. This can be closed as far as I am concerned

@tvdboom
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tvdboom commented Mar 24, 2023

alright. don't hesitate to open a new issue if something else arises

@tvdboom tvdboom closed this as completed Mar 24, 2023
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