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I want to use napari-splinedist but when I run it on an image, the process doesn't work.
The following exception is returned :
_AttributeError: 'CtrlLayer' object has no attribute 'ndisplay'
It seems that it comes from napari-splineit which is used by splinedist to plot the results and in fact when I try to add a new empty layer using splineit I got the same error.
Hi,
I want to use napari-splinedist but when I run it on an image, the process doesn't work.
The following exception is returned :
_AttributeError: 'CtrlLayer' object has no attribute 'ndisplay'
It seems that it comes from napari-splineit which is used by splinedist to plot the results and in fact when I try to add a new empty layer using splineit I got the same error.
Full error is :
"
AttributeError Traceback (most recent call last)
File ~/miniconda3/envs/napari-env/lib/python3.9/site-packages/napari_splineit/_widget.py:79, in SplineitQWidget._on_add_layers(self=<napari_splineit._widget.SplineitQWidget object>)
77 interpolator = SplineInterpolator(k=3)
78 base_name = self._get_layer_base_name()
---> 79 layer_factory(
self.viewer = Viewer(camera=Camera(center=(0.0, 248.7683971558929, 293.0533480914482), zoom=0.8677627853328994, angles=(0.0, 0.0, 90.0), perspective=0.0, mouse_pan=True, mouse_zoom=True), cursor=Cursor(position=(767.3432707057057, 585.760065017044), scaled=True, size=1, style=<CursorStyle.STANDARD: 'standard'>), dims=Dims(ndim=2, ndisplay=2, last_used=0, range=((0.0, 512.0, 1.0), (0.0, 640.0, 1.0)), current_step=(255, 319), order=(0, 1), axis_labels=('0', '1')), grid=GridCanvas(stride=1, shape=(-1, -1), enabled=False), layers=[<Image layer 'a5e695fce80dc03efb6665a9ec14500ab47f4ee9f6437531388dd3cc32c90db1' at 0x7f31b6bc4fd0>, <InterpolatedLayer layer 'Splines-Interpolated' at 0x7f30441064c0>], help='', status={'layer_base': 'Splines-Interpolated', 'source_type': '', 'plugin': '', 'coordinates': ' [767 586]: [, ]'}, tooltip=Tooltip(visible=False, text=''), theme='dark', title='napari', mouse_over_canvas=True, mouse_move_callbacks=[], mouse_drag_callbacks=[], mouse_double_click_callbacks=[], mouse_wheel_callbacks=[<function dims_scroll at 0x7f31bfa719d0>], _persisted_mouse_event={}, _mouse_drag_gen={}, _mouse_wheel_gen={}, keymap={})
self = <napari_splineit._widget.SplineitQWidget object at 0x7f31b6937ca0>
interpolator = <napari_splineit.interpolation.spline.SplineInterpolator object at 0x7f30441f4610>
base_name = 'Splines'
80 self.viewer,
81 interpolator=interpolator,
82 ctrl_layer_name=f"{base_name}-CTRL",
83 interpolated_layer_name=f"{base_name}-Interpolated",
84 )
File ~/miniconda3/envs/napari-env/lib/python3.9/site-packages/napari_splineit/layer/layer_factory.py:29, in layer_factory(viewer=Viewer(camera=Camera(center=(0.0, 248.7683971558...ouse_drag_gen={}, _mouse_wheel_gen={}, keymap={}), interpolator=<napari_splineit.interpolation.spline.SplineInterpolator object>, data=None, ctrl_layer_name='Splines-CTRL', interpolated_layer_name='Splines-Interpolated', edge_color=None, face_color=None, current_edge_color=None, current_face_color=None, edge_width=None, z_index=None, opacity=0.7)
24 interpolated_layer = InterpolatedLayer(
25 name=interpolated_layer_name, opacity=opacity
26 )
27 viewer.add_layer(interpolated_layer)
---> 29 ctrl_layer = CtrlLayer(
CtrlLayer = <class 'napari_splineit.layer._ctrl_layer.CtrlLayer'>
ctrl_layer_name = 'Splines-CTRL'
{
"interpolator": interpolator,
"interpolated_layer": interpolated_layer,
} = {'interpolator': <napari_splineit.interpolation.spline.SplineInterpolator object at 0x7f30441f4610>, 'interpolated_layer': <InterpolatedLayer layer 'Splines-Interpolated' at 0x7f30441064c0>}
interpolator = <napari_splineit.interpolation.spline.SplineInterpolator object at 0x7f30441f4610>
interpolated_layer = <InterpolatedLayer layer 'Splines-Interpolated' at 0x7f30441064c0>
30 name=ctrl_layer_name,
31 metadata={
32 "interpolator": interpolator,
33 "interpolated_layer": interpolated_layer,
34 },
35 interpolator=interpolator,
36 interpolated_layer=interpolated_layer,
37 )
39 viewer.add_layer(ctrl_layer)
41 if data is not None:
File ~/miniconda3/envs/napari-env/lib/python3.9/site-packages/napari_splineit/layer/_ctrl_layer.py:88, in CtrlLayer.init(self=<CtrlLayer layer 'Splines-CTRL'>, interpolator=<napari_splineit.interpolation.spline.SplineInterpolator object>, interpolated_layer=<InterpolatedLayer layer 'Splines-Interpolated'>, *args=(), **kwargs={'metadata': {'interpolated_layer': <InterpolatedLayer layer 'Splines-Interpolated'>, 'interpolator': <napari_splineit.interpolation.spline.SplineInterpolator object>}, 'name': 'Splines-CTRL'})
82 self.interpolated_layer.ctrl_layer = self
83 super().init(
84 *args, edge_color="transparent", face_color="transparent", **kwargs
85 )
87 self._data_view = CtrlLayerShapeList(
---> 88 ndisplay=self._ndisplay,
self = <CtrlLayer layer 'Splines-CTRL' at 0x7f30996d8610>
self._data_view = <napari.layers.shapes._shape_list.ShapeList object at 0x7f3099748490>
interpolated_layer = <InterpolatedLayer layer 'Splines-Interpolated' at 0x7f30441064c0>
89 ctrl_layer=self,
90 interpolated_layer=interpolated_layer,
91 )
92 self._data_view.slice_key = np.array(self._slice_indices)[
93 list(self._dims_not_displayed)
94 ]
AttributeError: 'CtrlLayer' object has no attribute '_ndisplay'
"
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