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AIRR standards compliance #18

Closed
9 tasks done
torognes opened this issue May 26, 2021 · 10 comments
Closed
9 tasks done

AIRR standards compliance #18

torognes opened this issue May 26, 2021 · 10 comments
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enhancement New feature or request

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torognes commented May 26, 2021 •
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Make CompAIRR compliant with the AIRR standard for software tools:

Needed:

  • Open source code in public repository
  • AIRR standard file formats etc
  • Include example data and automated check
  • Provide information about run parameters as part of the output.
  • Provide a container build file
  • Provide user support, clearly stating which level of support users can expect, and how and from whom to obtain it.

Further steps:

  • Apply for ratification
  • Obtain certificate of compliance
  • Add badge
@torognes torognes changed the title AIRR compliance AIRR standards compliance May 26, 2021
@torognes torognes self-assigned this May 26, 2021
@torognes torognes added the enhancement New feature or request label May 26, 2021
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Added info about support to README.md

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Now reads AIRR compliant TSV input files.

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torognes commented Jun 1, 2021

Added small example / test set and automated check (run Make test).

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torognes commented Jun 3, 2021

Dockerfile added in commit 4efd2c1.

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torognes commented Jun 3, 2021

Made the repository public with version 1.0.0, commit 1fe38fc.

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torognes commented Jun 3, 2021

Should be compliant now. Perhaps we should submit it to the AIRR Software WG requesting ratification against the standard. And have a Certificate of compliance?

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A request was sent on 7 June 2021.

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torognes commented Sep 2, 2021

A decision is expected in September.

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Ratified on 15 September 2021.

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torognes commented Oct 6, 2021

Badge added some days ago.

@torognes torognes closed this as completed Oct 6, 2021
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