/
catalog.py
285 lines (255 loc) · 10.1 KB
/
catalog.py
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
"""
Catalog search functionality
"""
from pathlib import Path
from typing import Dict, Union, List
from geopandas import GeoDataFrame
from shapely.geometry import shape
from shapely.geometry import Point, Polygon
from geojson import Feature, FeatureCollection
from tqdm import tqdm
from up42.auth import Auth
from up42.tools import Tools
from up42.viztools import VizTools
from up42.utils import get_logger, any_vector_to_fc, fc_to_query_geometry
logger = get_logger(__name__)
supported_sensors = {
"pleiades": {
"blocks": [
"oneatlas-pleiades-fullscene",
"oneatlas-pleiades-aoiclipped",
],
"provider": "oneatlas",
},
"spot": {
"blocks": [
"oneatlas-spot-fullscene",
"oneatlas-spot-aoiclipped",
],
"provider": "oneatlas",
},
"sentinel1": {
"blocks": [
"sobloo-s1-grd-fullscene",
"sobloo-s1-grd-aoiclipped",
"sobloo-s1-slc-fullscene",
],
"provider": "sobloo-image",
},
"sentinel2": {
"blocks": [
"sobloo-s2-l1c-fullscene",
"sobloo-s2-l1c-aoiclipped",
],
"provider": "sobloo-image",
},
"sentinel3": {"blocks": ["sobloo-s3"], "provider": "sobloo-image"},
"sentinel5p": {
"blocks": [
"sobloo-s5p",
],
"provider": "sobloo-image",
},
}
# pylint: disable=duplicate-code
class Catalog(VizTools, Tools):
def __init__(self, auth: Auth):
"""
The Catalog class enables access to the UP42 catalog search. You can search
for satellite image scenes (for different sensors and criteria like cloud cover),
plot the scene coverage and download and plot the scene quicklooks.
"""
self.auth = auth
self.quicklooks = None
def __repr__(self):
return f"Catalog(auth={self.auth})"
# pylint: disable=dangerous-default-value
@staticmethod
def construct_parameters(
geometry: Union[
Dict,
Feature,
FeatureCollection,
List,
GeoDataFrame,
Point,
Polygon,
],
start_date: str = "2020-01-01",
end_date: str = "2020-01-30",
sensors: List[str] = [
"pleiades",
"spot",
"sentinel1",
"sentinel2",
"sentinel3",
"sentinel5p",
],
limit: int = 10,
max_cloudcover: float = 100,
sortby: str = "acquisitionDate",
ascending: bool = True,
) -> Dict:
"""
Follows STAC principles and property names.
Args:
geometry: The search geometry, one of Dict, Feature, FeatureCollection,
List, GeoDataFrame, Point, Polygon.
start_date: Query period starting day, format "2020-01-01".
end_date: Query period ending day, format "2020-01-01".
sensors: The satellite sensors to search for, one or multiple of
["pleiades", "spot", "sentinel1", "sentinel2", "sentinel3", "sentinel5p"]
limit: The maximum number of search results to return (1-max.500).
max_cloudcover: Maximum cloudcover % - e.g. 100 will return all scenes,
8.4 will return all scenes with 8.4 or less cloudcover.
Ignored for sensors that have no cloudcover (e.g. sentinel1).
sortby: The property to sort by, "cloudCoverage", "acquisitionDate",
"acquisitionIdentifier", "incidenceAngle", "snowCover".
ascending: Ascending sort order by default, descending if False.
Returns:
The constructed parameters dictionary.
"""
datetime = f"{start_date}T00:00:00Z/{end_date}T23:59:59Z"
block_filters: List[str] = []
for sensor in sensors:
if sensor not in list(supported_sensors.keys()):
raise ValueError(
f"Currently only these sensors are supported: "
f"{list(supported_sensors.keys())}"
)
block_filters.extend(supported_sensors[sensor]["blocks"])
aoi_fc = any_vector_to_fc(
vector=geometry,
)
aoi_geometry = fc_to_query_geometry(
fc=aoi_fc,
geometry_operation="intersects",
squash_multiple_features="union",
)
sort_order = "asc" if ascending else "desc"
query_filters = {"dataBlock": {"in": block_filters}}
if sensors != ["sentinel1"]:
query_filters["cloudCoverage"] = {"lte": max_cloudcover} # type: ignore
search_parameters = {
"datetime": datetime,
"intersects": aoi_geometry,
"limit": limit,
"query": query_filters,
"sortby": [{"field": f"properties.{sortby}", "direction": sort_order}],
}
return search_parameters
def search(
self, search_parameters: Dict, as_dataframe: bool = True
) -> Union[GeoDataFrame, Dict]:
"""
Searches the catalog for the the search parameters and returns the metadata of
the matching scenes.
Args:
search_parameters: The catalog search parameters, see example.
as_dataframe: return type, GeoDataFrame if True (default), FeatureCollection if False.
Returns:
The search results as a GeoDataFrame, optionally as json dict.
Example:
```python
search_parameters={
"datetime": "2019-01-01T00:00:00Z/2019-01-15T23:59:59Z",
"intersects": {
"type": "Polygon",
"coordinates": [[[13.32113746,52.73971768],[13.15981158,52.2092959],
[13.62204483,52.15632025],[13.78859517,52.68655119],[13.32113746,
52.73971768]]]},
"limit": 10,
"sortby": [{"field" : "properties.acquisitionDate", "direction" : "asc"}]
}
```
"""
logger.info(f"Searching catalog with search_parameters: {search_parameters}")
url = f"{self.auth._endpoint()}/catalog/stac/search"
response_json = self.auth._request("POST", url, search_parameters)
logger.info(f"{len(response_json['features'])} results returned.")
dst_crs = "EPSG:4326"
df = GeoDataFrame.from_features(response_json, crs=dst_crs)
if df.empty:
if as_dataframe:
return df
else:
return df.__geo_interface__
# Filter to actual geometries intersecting the aoi (Sobloo search uses a rectangular
# bounds geometry, can contain scenes that touch the aoi bbox, but not the aoi.
# So number returned images not consistent with set limit.
# TODO: Resolve on backend
geometry = search_parameters["intersects"]
poly = shape(geometry)
df = df[df.intersects(poly)]
df = df.reset_index(drop=True)
# Make scene_id more easily accessible
def _get_scene_id(row):
if row["providerName"] == "oneatlas":
row["scene_id"] = row["providerProperties"]["parentIdentifier"]
elif row["providerName"] in ["sobloo-radar", "sobloo-image"]:
row["scene_id"] = row["providerProperties"]["identification"][
"externalId"
]
return row
# Search result dataframe can contain scenes of multiple sensors, need to apply row by row.
df = df.apply(_get_scene_id, axis=1)
df.crs = dst_crs # apply resets the crs
if as_dataframe:
return df
else:
return df.__geo_interface__
def download_quicklooks(
self,
image_ids: List[str],
sensor: str,
output_directory: Union[str, Path] = None,
) -> List[str]:
"""
Gets the quicklooks of scenes from a single sensor. After download, can
be plotted via catalog.plot_quicklooks().
Args:
image_ids: List of provider image_ids e.g. ["6dffb8be-c2ab-46e3-9c1c-6958a54e4527"].
Access the search results id column via `list(search_results.id)`.
sensor: The satellite sensor of the image_ids, one of "pleiades", "spot",
"sentinel1", "sentinel2", "sentinel3", "sentinel5p".
output_directory: The file output directory, defaults to the current working
directory.
Returns:
List of quicklook image output file paths.
"""
if sensor not in list(supported_sensors.keys()):
raise ValueError(
f"Currently only these sensors are supported: "
f"{list(supported_sensors.keys())}"
)
provider = supported_sensors[sensor]["provider"]
logger.info(
f"Getting quicklooks from provider {provider} for image_ids: "
f"{image_ids}"
)
if output_directory is None:
output_directory = Path.cwd() / f"project_{self.auth.project_id}/catalog"
else:
output_directory = Path(output_directory)
output_directory.mkdir(parents=True, exist_ok=True)
logger.info(f"Download directory: {str(output_directory)}")
if isinstance(image_ids, str):
image_ids = [image_ids]
out_paths: List[str] = []
for image_id in tqdm(image_ids):
try:
url = f"{self.auth._endpoint()}/catalog/{provider}/image/{image_id}/quicklook"
response = self.auth._request(
request_type="GET", url=url, return_text=False
)
out_path = output_directory / f"quicklook_{image_id}.jpg"
out_paths.append(str(out_path))
with open(out_path, "wb") as dst:
for chunk in response:
dst.write(chunk)
except ValueError:
logger.warning(
f"Image with id {image_id} does not have quicklook available. Skipping ..."
)
self.quicklooks = out_paths # pylint: disable=attribute-defined-outside-init
return out_paths