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part04, part05: Fix typos and other cosmetic changes.
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riccardomurri committed Jul 12, 2016
1 parent aa9a7bf commit 2d32ddb
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Binary file modified docs/programmers/tutorials/workflows/part04.pdf
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8 changes: 4 additions & 4 deletions docs/programmers/tutorials/workflows/part04.tex
Expand Up @@ -224,7 +224,7 @@ \part{Post-processing}

\+
The path to the output directory is available as
\lstinline|self.output_dir|; if \texttt{stdout} and \texttt{srderr}
\lstinline|self.output_dir|; if \texttt{stdout} and \texttt{stderr}
have been captured, the \textbf{relative} paths to the capture files
are available as \lstinline|self.stdout| and
\lstinline|self.stderr|.
Expand All @@ -250,7 +250,7 @@ \part{Post-processing}


\begin{frame}
\begin{exercise*}[3.A]
\begin{exercise*}[4.A]

Modify the \texttt{GrayscaleApp} application to print a message
``\texttt{Conversion of '\emph{filename}' done.}'' whenever
Expand Down Expand Up @@ -339,7 +339,7 @@ \part{Termination status}


\begin{frame}
\begin{exercise*}[3.B]
\begin{exercise*}[4.B]

Write a \texttt{TermStatusApp} application, which is like a
generic \texttt{Application} class with the addition that upon
Expand Down Expand Up @@ -386,7 +386,7 @@ \part{Termination status}


\begin{frame}[fragile]
\begin{exercise*}[3.C] \emph{(Difficult)} \small
\begin{exercise*}[4.C] \emph{(Difficult)} \small

MATLAB has the annoying habit of exiting with code 0 even when some error occurred.

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14 changes: 7 additions & 7 deletions docs/programmers/tutorials/workflows/part05.tex
Expand Up @@ -56,8 +56,8 @@
\begin{frame}
\frametitle{Command-line argument processing in GC3Pie}
GC3Pie's scripts use the standard Python library
\href{https://docs.python.org/2/howto/argparse.html}{\texttt{argparse}}.
GC3Pie scripts use the standard Python
library~\href{https://docs.python.org/2/howto/argparse.html}{\texttt{argparse}}.
\+
However, differently from \texttt{argparse}, GC3Pie scripts use
Expand All @@ -69,8 +69,8 @@
\frametitle{Positional argument processing}
Positional arguments are defined in a method called
\texttt{setup\_args}; override it in derived classes to change what
arguments are accepted, their names and number.
\lstinline|setup_args()|; override it in derived classes to change
what arguments are accepted, their names and number.
\+
This is the default implementation:
Expand Down Expand Up @@ -215,7 +215,7 @@


\begin{frame}[fragile]
\frametitle{From grayscale to colors}
\frametitle{Detour: From grayscale to colors}
\begin{sh}
$ convert gray-lena.jpg \
( xc:blue xc:magenta xc:yellow +append ) \
Expand Down Expand Up @@ -407,7 +407,7 @@
\begin{frame}[fragile]
\frametitle{BLAST}
\frametitle{Detour: BLAST}
BLAST is a suite of programs to perform search and alignment of
nucleotides and proteins.
Expand All @@ -419,7 +419,7 @@
\+ The command-line invocation for one such comparison would look like this:
\begin{sh}
$ blastpgp -i new.faa -d known.faa \
-e 1e6 -m 9 -o output.txt
-e 1e-6 -m 9 -o output.txt
\end{sh}%$
\end{frame}

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