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#! /usr/bin/env python | ||
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import os | ||
import sys | ||
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from gc3libs.cmdline import SessionBasedScript | ||
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if __name__ == '__main__': | ||
from argp import AScript | ||
AScript().run() | ||
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class AScript(SessionBasedScript): | ||
""" | ||
Minimal workflow scaffolding. | ||
""" | ||
def __init__(self): | ||
super(AScript, self).__init__(version='1.0') | ||
def new_tasks(self, extra): | ||
return [] | ||
def setup_args(self): | ||
# this argument is a string (default type) | ||
self.add_param('input', type=str, help="Input file") | ||
# the `radius` argument is an integer | ||
self.add_param('radius', type=int, help="Convolution radius") | ||
# the `sigma` argument is a floating-point number | ||
self.add_param('sigma', type=float, help="Threshold") |
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docs/programmers/tutorials/workflows/downloads/topblast/176279.9.PATRIC.faa
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docs/programmers/tutorials/workflows/downloads/topblast/176280.10.PATRIC.faa
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docs/programmers/tutorials/workflows/downloads/topblast/359786.13.PATRIC.faa
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docs/programmers/tutorials/workflows/downloads/topblast/359787.11.PATRIC.faa
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