fix: using custom S3 endpoint

[holtgrewe]

No description provided.

[codecov]

Codecov Report

Attention: Patch coverage is 41.86047% with 25 lines in your changes missing coverage. Please review.

Project coverage is 81%. Comparing base (9a661b0) to head (2819e14).
Report is 18 commits behind head on main.

Additional details and impacted files

@@         Coverage Diff         @@
##           main   #362   +/-   ##
===================================
- Coverage    81%    81%   -1%     
===================================
  Files        44     44           
  Lines      6115   6148   +33     
===================================
+ Hits       4967   4984   +17     
- Misses     1148   1164   +16     

Files	Coverage Δ
src/common/s3.rs	38% <100%> (+<1%)	⬆️
src/seqvars/query/mod.rs	88% <100%> (ø)
src/strucvars/ingest/mod.rs	92% <ø> (ø)
src/seqvars/ingest/mod.rs	89% <0%> (+<1%)	⬆️
src/seqvars/prefilter/mod.rs	83% <85%> (+2%)	⬆️
src/common/noodles.rs	44% <8%> (-7%)	⬇️

... and 5 files with indirect coverage changes