/
base.txt
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/
base.txt
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# Read .env files in Django.
python-dotenv ==0.9.1
# Wheel 0.25+ needed to install certain packages on CPython 3.5+
# like Pillow and psycopg2
# See http://bitly.com/wheel-building-fails-CPython-35
# Verified bug on Python 3.5.1
wheel==0.34.2
# Conservative Django
django>=1.11.29, <2.0
# Configuration
django-environ>=0.4.5, <0.5
# Forms
django-crispy-forms>=1.7.2, <1.8
# Models
django-model-utils>=3.2.0, <3.3
# Password storage
argon2-cffi>=20.1.0, <20.2
# Python-PostgreSQL Database Adapter
psycopg2-binary>=2.8.4, <2.9
# Unicode slugification
awesome-slugify>=1.6.5, <1.7
# Time zones support
pytz>=2020.5
# Versioning
versioneer>=0.19
# Online documentation via django-docs.
Sphinx>=3.4.3, <3.5
django-docs>=0.3.1, <0.4
sphinx-rtd-theme>=0.5.1, <0.6
######################
# Project app imports
######################
# Django-plugins (with Django 1.11 support)
-e git+https://github.com/mikkonie/django-plugins.git@1bc07181e6ab68b0f9ed3a00382eb1f6519e1009#egg=django-plugins
# Rules for permissions
rules>=2.2, <2.3
# REST framework
djangorestframework>=3.11.0, <3.12
# Keyed list addon for DRF
-e git+https://github.com/mikkonie/drf-keyed-list.git@b03607b866c5706b0e1ea46a7eeaab6527030734#egg=drf-keyed-list
# Token authentication
django-rest-knox>=4.1.0, <4.2
# Markdown field support
markdown>=3.3.3, <3.4
django-markupfield>=1.5.1, <1.6
django-pagedown>=1.0.6, <1.1 # NOTE: v2.x requires Django 2.1+
mistune>=0.8.4, <0.9
# Background Jobs requirements
celery<4.2 # pyup: <4.2 # blocker: https://github.com/celery/celery/issues/4878
django-postgres-copy==2.3.5
-e git+https://github.com/bihealth/sodar_core.git@159ff602400182558fb5612c0c7cf13967fa1039#egg=django-sodar-core
# Simplejson is more advanced than then built-in one.
simplejson >=2.1
# Useful helper attrs.
attrs >=19.1.0
cattrs
python-dateutil
# Writing of Excel (XLSX) files.
xlsxwriter ==1.1.2
# Writing of VCF files
vcfpy
pysam==0.15.2
# SQL Alchemy and Django integrate
SQLAlchemy ==1.3.0
aldjemy ==0.9.1
sqlparse
# Kenneth Reitz's wonderful HTTP library.
requests ==2.22.0
# Parsing of HTML
beautifulsoup4==4.8.1
# Numpy and friends
numpy ==1.14.3
pandas ==0.23.4
# Simple object proxies.
wrapt == 1.10.11
# Interval binning
interval-binning ==1.0.0
# Natural language processing toolkit
nltk
# Parsing of ISA-tab
altamisa ==0.2.8
# Login as every user
django-su
# Sentry client.
sentry-sdk ==0.14.0
# Redis support
redis==3.3.8
# HTTP Proxy for forwarding AJAX requests.
django-http-proxy==0.4.3
# YAML parsing
PyYAML
django-encrypted-model-fields==0.5.8
requests-http-signature==0.2.0
djangorestframework-httpsignature==1.0.0
httpsig==1.3.0
cryptography ==3.4.6
# Webpack loading
django-webpack-loader==0.7.0
# XML processing
lxml ==4.6.3
# Django autocomplete light (DAL)
django-autocomplete-light==3.2.10 # Higher versions require Django 2.x
# SAML2 support for SSO
django-saml2-auth-ai>=2.1.6, <2.2