Extr_SuperSeggerCells issues

[stellamargaret]

I'm having issues when using the Extr_SuperSeggerCells command to try to import my files. I get the error message:
"Error in extr_SuperSeggerCells("bactMAP_import_data", frames = 1, mag = "F3") :
Cannot find SuperSegger output folder(s) starting with 'xy' in the directory 'bactMAP_import_data'. Please make sure to set the correct path in variable 'loc'",
whenever I try to import my files. The folders are definitely in the folder that I have indicated.

The exact command that I have been using is:
> extr_SuperSeggerCells("bactMAP_import_data", frames = 1, mag = "F3")

I've tried to change the name and location of the folder to see if that makes any difference, but it does not. I have both read and write permissions for the files.

[vrrenske]

Hi Stella. First of all, I'm so sorry for not replying to your message. I've been far from responsive the last year, I apologise.
Would you still be interested to troubleshoot this? Then I'd be happy to find out what's going wrong.
best wishes & sorry again, Renske