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Hello,
I am using the program to estimate the PCR duplicates in exome seq data. However, the first code run smoothly. The second is not running I would say due to problem with python interpreter. I am using Python 3.9.13. When I run
Yes, it was written some time ago and the python code was tested with Python 2.7. I don't think that it will work with Python 3.9 without modifications.
Hello,
I am using the program to estimate the PCR duplicates in exome seq data. However, the first code run smoothly. The second is not running I would say due to problem with python interpreter. I am using Python 3.9.13. When I run
estimate_PCRduprate.py -i sample.hetreads -f exome > sample.PCRdups
It gives me an error.
for c in xrange(MAX_CLUSTER_SIZE): duplicate_counts.append([0,0.0,0.0,0.0]);
TabError: inconsistent use of tabs and spaces in indentation
Is the software compatible only certain version of python? Any suggestion?
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