[2023] Several tests fail

[yurivict]

log

Version: 2023
OS: FreeBSD 13.2
clang-16

[junghans]

There are missing symbols in the libcotca:

Start 111: integration_Run_csg_map_gmx
111/249 Test #111: integration_Run_csg_map_gmx ........................***Failed    0.08 sec
ld-elf.so.1: /usr/ports/science/votca/work/.build/csg/src/libcsg/libvotca_csg.so.2023: Undefined symbol "_Z8read_tpxRKNSt3__14__fs10filesystem4pathEP10t_inputrecPA3_dPiS8_S8_P10gmx_mtop_t"

[junghans]

And grompp segfaults:

103/249 Test #103: integration_Run_gmx_grompp .........................***Exception: SegFault  0.07 sec

[junghans]

And then for iie.py is complains about the format ?!

[junghans]

@yurivict can you provide a dockerfile to reproduce this?

[yurivict]

can you provide a dockerfile to reproduce this?

Docker doesn't support FreeBSD.

This happens when the FreeBSD port is built and tested.

I have instructions on how to reproduce such problems:

Is there an easy way to test under FreeBSD?

1. Install the FreeBSD VM image into VirtualBox.
2. Boot FreeBSD
3. Install git: pkg install git
4. Check out the ports tree: git clone https://git.FreeBSD.org/ports.git /usr/ports
5. cd /usr/ports/science/votca
6. Install dependencies: pkg install -A make missing
7. Build: make
8. Run tests: make test

[junghans]

What about any container from https://hub.docker.com/search?q=freebsd ?

I would really like to make it a part of our CI.

[junghans]

@yurivict is that fixed?

Also note to self: https://github.com/vmactions/freebsd-vm