Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

FR: support YAML schema validation #130

Open
ramiromagno opened this issue Jun 3, 2023 · 1 comment
Open

FR: support YAML schema validation #130

ramiromagno opened this issue Jun 3, 2023 · 1 comment

Comments

@ramiromagno
Copy link

Example: The GWAS Catalog Summary Statistics Format (GWAS-SSF)

The metadata YAML file of the GWAS-SSF standard obeys a schema standard.

Seemingly this validation can be achieved with https://github.com/23andMe/Yamale, a python tool.

How hard would it be to perform this in R?

@spgarbet
Copy link
Member

It would be quite difficult with the way the library is structured. The library is built around a yaml1.1 parser library that has not made the transition to yaml1.2.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

2 participants