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I am attempting to install HiCPlus by following the steps outlined in the tutorial :
conda config --add channels pytorch
conda create -n plus python=3.6 numpy pytorch torchvision scipy
python3 -m pip install hic-straw
source activate plus
git clone https://github.com/wangjuan001/hicplus.git
cd hicplus
python setup.py install
After this, I tried running the command :
hicplus -h
I received the following error :
Traceback (most recent call last):
File "/home/miniconda3/envs/plus/bin/hicplus", line 4, in import('pkg_resources').run_script('hicplus==1.1.0', 'hicplus')
File "/home/miniconda3/envs/plus/lib/python3.6/site-packages/pkg_resources/init.py", line 651, in run_script
self.require(requires)[0].run_script(script_name, ns)
File "/home/miniconda3/envs/plus/lib/python3.6/site-packages/pkg_resources/init.py", line 1448, in run_script
exec(code, namespace, namespace)
File "/home/miniconda3/envs/plus/lib/python3.6/site-packages/hicplus-1.1.0-py3.6.egg/EGG-INFO/scripts/hicplus", line 3, in
from hicplus import pred_chromosome, train_models, pred_genome
File "/home/miniconda3/envs/plus/lib/python3.6/site-packages/hicplus-1.1.0-py3.6.egg/hicplus/pred_chromosome.py", line 8, in
import straw
ModuleNotFoundError: No module named 'straw'
Even though I tried manually adding " import straw " in pred_chromosome.py, I continue to encounter the same error.
The text was updated successfully, but these errors were encountered:
I am attempting to install HiCPlus by following the steps outlined in the tutorial :
conda config --add channels pytorch
conda create -n plus python=3.6 numpy pytorch torchvision scipy
python3 -m pip install hic-straw
source activate plus
git clone https://github.com/wangjuan001/hicplus.git
cd hicplus
python setup.py install
After this, I tried running the command :
hicplus -h
I received the following error :
Traceback (most recent call last):
File "/home/miniconda3/envs/plus/bin/hicplus", line 4, in
import('pkg_resources').run_script('hicplus==1.1.0', 'hicplus')
File "/home/miniconda3/envs/plus/lib/python3.6/site-packages/pkg_resources/init.py", line 651, in run_script
self.require(requires)[0].run_script(script_name, ns)
File "/home/miniconda3/envs/plus/lib/python3.6/site-packages/pkg_resources/init.py", line 1448, in run_script
exec(code, namespace, namespace)
File "/home/miniconda3/envs/plus/lib/python3.6/site-packages/hicplus-1.1.0-py3.6.egg/EGG-INFO/scripts/hicplus", line 3, in
from hicplus import pred_chromosome, train_models, pred_genome
File "/home/miniconda3/envs/plus/lib/python3.6/site-packages/hicplus-1.1.0-py3.6.egg/hicplus/pred_chromosome.py", line 8, in
import straw
ModuleNotFoundError: No module named 'straw'
Even though I tried manually adding " import straw " in pred_chromosome.py, I continue to encounter the same error.
The text was updated successfully, but these errors were encountered: